RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TSPAN14Q8NG11 270 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 OR5T2Q8NGG2 359 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 OR52N4Q8NGI2 321 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 OR6M1Q8NGM8 313 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 KCNG3Q8TAE7 436 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 UPRTQ96BW1 309 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 CENPOQ9BU64 300 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 FGF23Q9GZV9 251 aaPredicted RBP8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 GAL3ST2Q9H3Q3 398 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 PPP1R3EQ9H7J1 279 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 IFT22Q9H7X7 185 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 OR6C3Q9NZP0 311 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 NUP50Q9UKX7 468 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 ING4Q9UNL4 249 aa8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 MRPS28Q9Y2Q9 187 aaKnown RBP8.52□□□□□ -1.05
TRAFD1-208ENST00000552890 POM121CA8CG34 1229 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 SPRY1O43609 319 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 MAS1P04201 325 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 BCL3P20749 454 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 FGF9P31371 208 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 PAX5Q02548 391 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 PAX2Q02962 417 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 DGUOKQ16854 277 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 SYT6Q5T7P8 510 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 AWAT2Q6E213 333 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 OR52W1Q6IF63 320 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 CD200R1LQ6Q8B3 271 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 Q71RC1 249 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 CROCCP3Q8IVE0 287 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 FAM216BQ8N7L0 139 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 DTX3Q8N9I9 347 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 C19orf18Q8NEA5 215 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 ZFAND2BQ8WV99 257 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 WDFY2Q96P53 400 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 URM1Q9BTM9 101 aaKnown RBP8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 TMPRSS13Q9BYE2 586 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 PLGRKTQ9HBL7 147 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 SF3B6Q9Y3B4 125 aaKnown RBP8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 LINC00312Q9Y6C7 94 aa8.51□□□□□ -1.05
TRAFD1-208ENST00000552890 TRGV10A0A0A0MS01 117 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 GABRPO00591 440 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 TCF21O43680 179 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 SCGNO76038 276 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 HTR3BO95264 441 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 PRTN3P24158 256 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 CALRP27797 417 aaKnown RBP8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 HTR2CP28335 458 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 ERVFRD-1P60508 538 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 COL10A1Q03692 680 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 ARL6IP1Q15041 203 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 GRK1Q15835 563 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 TMEM30BQ3MIR4 351 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 DMRTC1Q5HYR2 192 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 TRAT1Q6PIZ9 186 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 C9orf139Q6ZV77 190 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 OR2W3Q7Z3T1 314 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 ZNRF1Q8ND25 227 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 OR5D18Q8NGL1 313 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 RFT1Q96AA3 541 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 DACT3Q96B18 629 aaPredicted RBP8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 CREB3L1Q96BA8 519 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 MS4A7Q9GZW8 240 aaPredicted RBP8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 ZNF696Q9H7X3 374 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 RBFOX1Q9NWB1 397 aaKnown RBP8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 TAS2R3Q9NYW6 316 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 ONECUT1Q9UBC0 465 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 CTSZQ9UBR2 303 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 STUB1Q9UNE7 303 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 ST3GAL6Q9Y274 331 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 UBE2J1Q9Y385 318 aaPredicted RBP8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 MAB21L2Q9Y586 359 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 V9GY05 133 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 FN1P02751 2386 aaKnown RBP8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 ABCA2Q9BZC7 2435 aa8.5□□□□□ -1.05
TRAFD1-208ENST00000552890 MCRIP1C9JLW8 97 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 SLC17A2O00624 439 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 ANGPTL7O43827 346 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 ZNF737O75373 536 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 OR7C1O76099 320 aaPredicted RBP8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 OR2H2O95918 312 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 CD37P11049 281 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 GZMHP20718 246 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 EPHA1P21709 976 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 MAP2K4P45985 399 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 NPBWR2P48146 333 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 ARHGDIBP52566 201 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 EDDM3BP56851 147 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 RBM11P57052 281 aaKnown RBP8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 SEC61A1P61619 476 aaKnown RBP8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 SLC22A6Q4U2R8 563 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 PAN3Q58A45 887 aaKnown RBP8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 C1orf100Q5SVJ3 147 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 GLIPR1L1Q6UWM5 242 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 ZNF554Q86TJ5 538 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 FAM185AQ8N0U4 392 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 CD177Q8N6Q3 437 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 OR13D1Q8NGV5 346 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 TMEM203Q969S6 136 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 ZNF488Q96MN9 340 aa8.49□□□□□ -1.05
TRAFD1-208ENST00000552890 KCTD7Q96MP8 289 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms