RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TBCEQ15813 527 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 ACSM3Q53FZ2 586 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 LIPKQ5VXJ0 399 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 NCR3LG1Q68D85 454 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 C9orf139Q6ZV77 190 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 PDZD9Q8IXQ8 264 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 BCL6BQ8N143 479 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 SIGLECL1Q8N7X8 197 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 NKX3-1Q99801 234 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 CHST6Q9GZX3 395 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 METTL9Q9H1A3 318 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 ING4Q9UNL4 249 aa15.2■□□□□ 0.02
PRPF40B-216ENST00000552301 IGHV1-69DA0A0B4J2H0 117 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 CENPVL3A0A0U1RRI6 287 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 TMEM82A0PJX8 343 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 TRIM77I1YAP6 450 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 VENTXO95231 258 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 HTR3BO95264 441 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 OR2H2O95918 312 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 IGHV1-69P01742 117 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 CSTBP04080 98 aaKnown RBP15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 RUSC1-AS1Q66K80 236 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 ELP2Q6IA86 826 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 C1orf122Q6ZSJ8 110 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 ZNF367Q7RTV3 350 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 SVOPQ8N4V2 548 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 NKAIN3Q8N8D7 197 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 CHST4Q8NCG5 386 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 OR10K1Q8NGX5 313 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 ZDHHC16Q969W1 377 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 NR1H4Q96RI1 486 aaPredicted RBP15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 TCF7L1Q9HCS4 588 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 ISYNA1Q9NPH2 558 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 PCDHB16Q9NRJ7 776 aa15.19■□□□□ 0.02
PRPF40B-216ENST00000552301 FUOMA2VDF0 154 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 MAGEA13PA6NCF6 341 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 MGST3O14880 152 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 DEGS1O15121 323 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 CDRT1O95170 752 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 PSMA1P25786 263 aaKnown RBP15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 TRAM1Q15629 374 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 KRTAP24-1Q3LI83 254 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 TMEM200BQ69YZ2 307 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 METAP1DQ6UB28 335 aaPredicted RBP15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 C17orf107Q6ZR85 190 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 MGLLQ99685 303 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 MDFIQ99750 246 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 MXRA5Q9NR99 2828 aa15.18■□□□□ 0.02
PRPF40B-216ENST00000552301 hADV38S2A0JD32 116 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 MEGF11A6BM72 1044 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 PIN1P1O15428 100 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 PSPNO60542 156 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 MRPS14O60783 128 aaKnown RBP15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 ZNF780AO75290 641 aaPredicted RBP15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 SERPINA2P20848 420 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 PRTN3P24158 256 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 MEF2CQ06413 473 aaPredicted RBP15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 BAMBIQ13145 260 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 TPBGQ13641 420 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 ZNF273Q14593 569 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 IL13RA2Q14627 380 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 SLC22A6Q4U2R8 563 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 HSD17B12Q53GQ0 312 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 CEACAM19Q7Z692 300 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 Q8N7P7 452 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 OR4S1Q8NGB4 309 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 TMEM203Q969S6 136 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 MUL1Q969V5 352 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 YTHDF1Q9BYJ9 559 aaKnown RBP15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 SLITRK2Q9H156 845 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 IL36GQ9NZH8 169 aa15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 MRPS28Q9Y2Q9 187 aaKnown RBP15.17■□□□□ 0.02
PRPF40B-216ENST00000552301 CCL3L1P16619 93 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 CPEP16870 476 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 OR3A1P47881 315 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 PRB3Q04118 309 aaPredicted RBP15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 KLRD1Q13241 179 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 GPR176Q14439 515 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 INSL4Q14641 139 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 AWAT2Q6E213 333 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 ASCL4Q6XD76 172 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 TRAPPC6BQ86SZ2 158 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 CDH26Q8IXH8 852 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 ZFAND2BQ8WV99 257 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 ZNF48Q96MX3 618 aaPredicted RBP15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 C19orf24Q9BVV8 132 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 PPA2Q9H2U2 334 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 UNKLQ9H9P5 680 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 ACOT13Q9NPJ3 140 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 FAM96BQ9Y3D0 163 aa15.16■□□□□ 0.02
PRPF40B-216ENST00000552301 RNASEK-C17orf49H0YIS7 233 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 ZNF728P0DKX0 622 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 LMO1P25800 156 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 DLX1P56177 255 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 P2RX3P56373 397 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 ERVFRD-1P60508 538 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 RPS25P62851 125 aaKnown RBP15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 DEFB112Q30KQ8 113 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 PIGYQ3MUY2 71 aa15.15■□□□□ 0.02
PRPF40B-216ENST00000552301 PAN3Q58A45 887 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms