RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 THAP7Q9BT49 309 aaPredicted RBP6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 WDR13Q9H1Z4 485 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 RHOFQ9HBH0 211 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 DYNLRB1Q9NP97 96 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 RBMX2Q9Y388 322 aaKnown RBP6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 DSCAML1Q8TD84 2053 aa6.81□□□□□ -1.32
DEPDC4-207ENST00000549249 hCG_1807616A0A1W2PRN6 198 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A10PA6NDY2 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A18PA6NE21 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A16PA6NEW6 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A20PA6NIJ5 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A8PA6NJQ4 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A7PA6NKC0 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A22PA8MWA6 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A12PA8MX19 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A5PA8MXJ8 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A23PA8MXZ1 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 H7C417 338 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 PLA2G10O15496 165 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 ORC5O43913 435 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 PDCD6O75340 191 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 NXPH2O95156 264 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 LHBP01229 141 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 TFF1P04155 84 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 GSTP1P09211 210 aaKnown RBP6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A15PP0C7V4 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A13PP0C7W8 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A14PP0C7W9 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM90A24PP0C7X0 464 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 TNFSF4P23510 183 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 CD80P33681 288 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 GDNFP39905 211 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 CEBPDP49716 269 aaPredicted RBP6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 MRPS10P82664 201 aaKnown RBP6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 IL13RA2Q14627 380 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 TESK1Q15569 626 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM189A2Q15884 450 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 MPV17LQ2QL34 196 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM209AQ5JX71 171 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FAM201AQ5SY85 155 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 Q6ZPA2 131 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 Q8IYB0 196 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 OR10Z1Q8NGY1 313 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 Q8TCH9 128 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 DYRK2Q92630 601 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 DIRC2Q96SL1 478 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 SULT4A1Q9BR01 284 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 HDHD3Q9BSH5 251 aaPredicted RBP6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 FN3KRPQ9HA64 309 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 GCM1Q9NP62 436 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 PCDHB16Q9NRJ7 776 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 CBLN4Q9NTU7 201 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 TREM2Q9NZC2 230 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 RCC2Q9P258 522 aaKnown RBP6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 KLK11Q9UBX7 282 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 MTFP1Q9UDX5 166 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 HSF4Q9ULV5 492 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 ANAPC10Q9UM13 185 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 CACNG2Q9Y698 323 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 KIAA2026Q5HYC2 2103 aa6.8□□□□□ -1.32
DEPDC4-207ENST00000549249 UTP20O75691 2785 aaKnown RBP6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 TRAV24A0A0B4J272 114 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 LINC00854A0A1B0GVQ3 168 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 ISPDA4D126 451 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 VGLL3A8MV65 326 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 F8W735 103 aaPredicted RBP6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 SULT1C2O00338 296 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 SSX4O60224 188 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 OR7C1O76099 320 aaPredicted RBP6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 GOSR1O95249 250 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 CYB5R3P00387 301 aaPredicted RBP6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 HPXP02790 462 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 FCER2P06734 321 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 LPLP06858 475 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 GLRA1P23415 457 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 PRSS3P35030 304 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 PPOXP50336 477 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 SNRPD2P62316 118 aaKnown RBP6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 IKZF1Q13422 519 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 KLF9Q13886 244 aaPredicted RBP6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 ZNF146Q15072 292 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 PNLIPRP3Q17RR3 467 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 HACD4Q5VWC8 232 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 TRIQKQ629K1 86 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 SP5Q6BEB4 398 aaPredicted RBP6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 DCDC5Q6ZRR9 648 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 LINC00596Q86U02 117 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 GVQW1Q8N7I0 195 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 C19orf18Q8NEA5 215 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 C15orf40Q8WUR7 153 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 FCAMRQ8WWV6 532 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 ERGIC1Q969X5 290 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 NEDD4LQ96PU5 975 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 FAAP24Q9BTP7 215 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 TRAF4Q9BUZ4 470 aaPredicted RBP6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 C11orf54Q9H0W9 315 aaPredicted RBP6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 IFT22Q9H7X7 185 aa6.79□□□□□ -1.32
DEPDC4-207ENST00000549249 SAP30LQ9HAJ7 183 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms