RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

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Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 C11orf42Q8N5U0 333 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 OR56B2PQ8NGI1 322 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 PHYHIPLQ96FC7 376 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 CNBD2Q96M20 576 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 SCGB3A2Q96PL1 93 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 SHARPINQ9H0F6 387 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 SYT4Q9H2B2 425 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 GPR132Q9UNW8 380 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 LINC00312Q9Y6C7 94 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 HUWE1Q7Z6Z7 4374 aaKnown RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 FUOMA2VDF0 154 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 H3BN98 237 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 NRASP01111 189 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 EFNA4P52798 201 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 CLDN17P56750 224 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 OR12D2P58182 307 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 PMPCAQ10713 525 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 SMN1Q16637 294 aaKnown RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 TMEM176BQ3YBM2 270 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 TP53I3Q53FA7 332 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 PXDC1Q5TGL8 231 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 FAM90A2PQ658T7 463 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 SPINK14Q6IE38 97 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF343Q6P1L6 599 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 IL20RBQ6UXL0 311 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 Q6ZR03 302 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 DRAXINQ8NBI3 349 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 OR4K15Q8NH41 348 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 ANGPTL6Q8NI99 470 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 MRPL30Q8TCC3 161 aaKnown RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 EMG1Q92979 244 aaKnown RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 GAL3ST4Q96RP7 486 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 C16orf95Q9H693 158 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 RPRD1BQ9NQG5 326 aaKnown RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 KPTNQ9Y664 436 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 MPDZO75970 2070 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 NPIPB5A8MRT5 1133 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 PRSS46E5RG02 174 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 K7N7A8 449 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 MLNRO43193 412 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 CXCL13O43927 109 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 PDCD6O75340 191 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 LIPFP07098 398 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 TNFRSF1AP19438 455 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 HTR2CP28335 458 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 LOXL3P58215 753 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 RAB11BQ15907 218 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 MRGPRG-AS1Q2M3A8 158 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 LGALSLQ3ZCW2 172 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-212ENST00000549162 TCF23Q7RTU1 214 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 C1QL2Q7Z5L3 287 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 ZDHHC23Q8IYP9 409 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF843Q8N446 348 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 SDR9C7Q8NEX9 313 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 OR14L1PQ8NHC6 308 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 SNRNP40Q96DI7 357 aaKnown RBP4.06□□□□□ -1.76
SCAF11-212ENST00000549162 ADAT3Q96EY9 351 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-212ENST00000549162 SLITRK2Q9H156 845 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 EQTNQ9NQ60 294 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 TRAV2A0A0B4J234 112 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 PSPNO60542 156 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 SLC16A7O60669 478 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 SLC25A16P16260 332 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF32P17041 273 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 SRP9P49458 86 aaKnown RBP4.06□□□□□ -1.76
SCAF11-212ENST00000549162 ATP1B3P54709 279 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 TAS2R19P59542 299 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 ARG2P78540 354 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 SLC22A6Q4U2R8 563 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 NMSQ5H8A3 153 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 CCDC144NLQ6NUI1 221 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 HSD17B13Q7Z5P4 300 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-212ENST00000549162 DEFB119Q8N690 84 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 OR2G3Q8NGZ4 309 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 RNASE8Q8TDE3 154 aaKnown RBP4.06□□□□□ -1.76
SCAF11-212ENST00000549162 ADTRPQ96IZ2 230 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 RAB18Q9NP72 206 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 TIMM9Q9Y5J7 89 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 MED12LQ86YW9 2145 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 NPIPA5A0A0B4J1W7 369 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 A0A0G2JN53 185 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 CRYM-AS1A6NIL9 109 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 ANXA2P2A6NMY6 339 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 NPIPA7E9PJI5 369 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 CD2P06729 351 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 CECR9P0C854 216 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 NPIPA8P0DM63 369 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF823P16415 610 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 CCNOP22674 350 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 ZBTB25P24278 435 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 SSTR2P30874 369 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 OTX2P32243 289 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 TNFSF8P32971 234 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 TMEM50BP56557 158 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 RPS18P62269 152 aaKnown RBP4.06□□□□□ -1.76
SCAF11-212ENST00000549162 PAX8Q06710 450 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 SLC30A7Q8NEW0 376 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 OR10G4Q8NGN3 311 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 REEP6Q96HR9 211 aa4.06□□□□□ -1.76
SCAF11-212ENST00000549162 MEGF10Q96KG7 1140 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms