RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 AWAT1Q58HT5 328 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 SPIN3Q5JUX0 258 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 C6orf141Q5SZD1 244 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 DDI2Q5TDH0 399 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 HCP5Q6MZN7 132 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 METAP1DQ6UB28 335 aaPredicted RBP12.89□□□□□ -0.35
DDX54-205ENST00000548786 IZUMO2Q6UXV1 221 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 C1orf122Q6ZSJ8 110 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 C3orf56Q8N813 242 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 PGLYRP3Q96LB9 341 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 OR14A2Q96R54 314 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 PPA2Q9H2U2 334 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 PRDM13Q9H4Q3 707 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 FBN3Q75N90 2809 aa12.89□□□□□ -0.35
DDX54-205ENST00000548786 MAGEA13PA6NCF6 341 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 CDRT1O95170 752 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 FBP1P09467 338 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 HKR1P10072 659 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 CELP19835 753 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 CFPP27918 469 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 WNT4P56705 351 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 ZNF146Q15072 292 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 ZNF529Q6P280 563 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 C16orf87Q6PH81 154 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 TCF23Q7RTU1 214 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 TRAPPC6BQ86SZ2 158 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 SAXO1Q8IYX7 474 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 NANOGP1Q8N7R0 232 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 ZSCAN4Q8NAM6 433 aaPredicted RBP12.88□□□□□ -0.35
DDX54-205ENST00000548786 SSMEM1Q8WWF3 244 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 PAK1IP1Q9NWT1 392 aaPredicted RBP12.88□□□□□ -0.35
DDX54-205ENST00000548786 ERGIC3Q9Y282 383 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 PCDHGB5Q9Y5G0 923 aa12.88□□□□□ -0.35
DDX54-205ENST00000548786 TRAV8-7A0A075B6U6 113 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 TRBV5-5A0A0J9YX44 114 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 ALX3O95076 343 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 CDK1P06493 297 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 DLX6P56179 175 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 TAS2R43P59537 309 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 RPS11P62280 158 aaKnown RBP eCLIP12.87□□□□□ -0.35
DDX54-205ENST00000548786 RIPK1Q13546 671 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 ATXN7L3Q14CW9 347 aaPredicted RBP12.87□□□□□ -0.35
DDX54-205ENST00000548786 RSU1Q15404 277 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 Q499Y3 187 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 YIF1BQ5BJH7 314 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 C11orf42Q8N5U0 333 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 TBC1D15Q8TC07 691 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 CPNE2Q96FN4 548 aaPredicted RBP12.87□□□□□ -0.35
DDX54-205ENST00000548786 ZNF714Q96N38 554 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 VCX3BQ9H321 246 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 UNKLQ9H9P5 680 aaKnown RBP12.87□□□□□ -0.35
DDX54-205ENST00000548786 TMEM138Q9NPI0 162 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 SCN3BQ9NY72 215 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 ING4Q9UNL4 249 aa12.87□□□□□ -0.35
DDX54-205ENST00000548786 SF3B6Q9Y3B4 125 aaKnown RBP12.87□□□□□ -0.35
DDX54-205ENST00000548786 hCG_1809904A0A1W2PP81 198 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 A0A1W2PPE2 198 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 A0A1W2PR64 198 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 A0A1W2PRV1 198 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 hADV38S2A0JD32 116 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 H0YJX3 145 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 DEGS1O15121 323 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 HTR3BO95264 441 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 ZNF728P0DKX0 622 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 BDKRB2P30411 391 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 ZNF93P35789 620 aaPredicted RBP12.86□□□□□ -0.35
DDX54-205ENST00000548786 IER3P46695 156 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 COMPP49747 757 aaPredicted RBP12.86□□□□□ -0.35
DDX54-205ENST00000548786 AESQ08117 197 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 TAF9Q16594 264 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 PIGYQ3MUY2 71 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 PLA1AQ53H76 456 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 Q6P435 159 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 LDLRAD3Q86YD5 345 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 MYDGFQ969H8 173 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 CNBD2Q96M20 576 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 OR5M11Q96RB7 305 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 MND1Q9BWT6 205 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 HEXA-AS1Q9H8Q6 139 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 ZNF581Q9P0T4 197 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 ZNRD1Q9P1U0 126 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
DDX54-205ENST00000548786 A0A0G2JK05 382 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 C17orf98A8MV24 154 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 SLC33A1O00400 549 aaPredicted RBP12.85□□□□□ -0.35
DDX54-205ENST00000548786 MGST3O14880 152 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 GPR137BO60478 399 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 MAS1P04201 325 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 CRYBA1P05813 215 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 MDKP21741 143 aaPredicted RBP12.85□□□□□ -0.35
DDX54-205ENST00000548786 MYF6P23409 242 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 PTGFRP43088 359 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 GLIPR1P48060 266 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 MTNR1BP49286 362 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 P2RX3P56373 397 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 ACSM1Q08AH1 577 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 FOXL1Q12952 345 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 INSL4Q14641 139 aa12.85□□□□□ -0.35
DDX54-205ENST00000548786 LHFPL4Q7Z7J7 247 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms