RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 DIABLOQ9NR28 239 aa2.17□□□□□ -2.06
VPS29-205ENST00000548539 INIPQ9NRY2 104 aa2.17□□□□□ -2.06
VPS29-205ENST00000548539 MAT2BQ9NZL9 334 aa2.17□□□□□ -2.06
VPS29-205ENST00000548539 AK9Q5TCS8 1911 aa2.17□□□□□ -2.06
VPS29-205ENST00000548539 SIGLEC1Q9BZZ2 1709 aa2.17□□□□□ -2.06
VPS29-205ENST00000548539 F8VP50 259 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 CDIPTO14735 213 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 MYO1DO94832 1006 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 NPPAP01160 153 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 SOD3P08294 240 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 GCLMP48507 274 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 KCNJ3P48549 501 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 TTPAP49638 278 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 TPBGQ13641 420 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 CLEC12AQ5QGZ9 265 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 ERICH5Q6P6B1 374 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 SYCE1Q8N0S2 351 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 OR4C13Q8NGP0 309 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 OR2Y1Q8NGV0 311 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 BIRC8Q96P09 236 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 TAS2R13Q9NYV9 303 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 NRCAMQ92823 1304 aa2.16□□□□□ -2.06
VPS29-205ENST00000548539 LINC00854A0A1B0GVQ3 168 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 VGLL3A8MV65 326 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 M0QXV9 152 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 PLPP3O14495 311 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 SLC37A4O43826 429 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 TRGV3P03979 118 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 CECR9P0C854 216 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 SCGB1C2P0DMR2 95 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 NQO2P16083 231 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 PRTN3P24158 256 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 S100A2P29034 98 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 OR2B6P58173 313 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 KRTAP10-10P60014 251 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 FLI1Q01543 452 aaPredicted RBP2.15□□□□□ -2.07
VPS29-205ENST00000548539 XRCC4Q13426 336 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 ANGPT1Q15389 498 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 BSXQ3C1V8 233 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 CEACAM21Q3KPI0 293 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 LDLRAD2Q5SZI1 272 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 NXNL2Q5VZ03 156 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 CLEC18BQ6UXF7 455 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 LRRC6Q86X45 466 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 GATD1Q8NB37 220 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 SCGB1C1Q8TD33 95 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 SERPINB11Q96P15 392 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 PLA2G12AQ9BZM1 189 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 FBXL15Q9H469 300 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 ZNF492Q9P255 531 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 SNX24Q9Y343 169 aa2.15□□□□□ -2.07
VPS29-205ENST00000548539 BAZ2AQ9UIF9 1905 aaKnown RBP2.15□□□□□ -2.07
VPS29-205ENST00000548539 TMEM131Q92545 1883 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 TRAV8-3A0A0A6YYJ7 113 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 GOLGA8IPA6NC78 632 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 IGLL5B9A064 214 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 K7EPK0 472 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 TNFAIP8O95379 198 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 FSTL3O95633 263 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 IGHG2P01859 326 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 ZNF35P13682 527 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 SYT1P21579 422 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 TSPOP30536 169 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 GTF2H1P32780 548 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 RPA3P35244 121 aaPredicted RBP2.14□□□□□ -2.07
VPS29-205ENST00000548539 MAGEA6P43360 314 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 HBG1P69891 147 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 HBG2P69892 147 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 CD164Q04900 197 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 PRDX1Q06830 199 aaKnown RBP2.14□□□□□ -2.07
VPS29-205ENST00000548539 BAXQ07812 192 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 BAMBIQ13145 260 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 OR10J3Q5JRS4 329 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 GLYATQ6IB77 296 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 DPPA2Q7Z7J5 298 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 MARCH3Q86UD3 253 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 SELENOHQ8IZQ5 122 aaKnown RBP2.14□□□□□ -2.07
VPS29-205ENST00000548539 LINC00304Q8N9R0 145 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 OTUB2Q96DC9 234 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 PGLYRP3Q96LB9 341 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 CYTH2Q99418 400 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 PITX2Q99697 317 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 TAPBPLQ9BX59 468 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 MFSD1Q9H3U5 465 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 C14orf166Q9Y224 244 aaKnown RBP2.14□□□□□ -2.07
VPS29-205ENST00000548539 USH1CQ9Y6N9 552 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 SCN4AP35499 1836 aa2.14□□□□□ -2.07
VPS29-205ENST00000548539 KIAA1671Q9BY89 1806 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 MYBPHLA2RUH7 354 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 PGPA6NDG6 321 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 CD300LBA8K4G0 201 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 M0QX08 132 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 SULT1C2O00338 296 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 UBDO15205 165 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 SGCEO43556 437 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 ENTPD6O75354 484 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 KLHL2O95198 593 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 FADS2O95864 444 aaKnown RBP2.13□□□□□ -2.07
VPS29-205ENST00000548539 UGT2B10P36537 528 aa2.13□□□□□ -2.07
VPS29-205ENST00000548539 PLTPP55058 493 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms