RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 EEF1E1-BLOC1S5C9J1V9 151 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 RAB29O14966 203 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 POLR3GO15318 223 aaPredicted RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 EEF1E1O43324 174 aaKnown RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 CHST10O43529 356 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 CHST1O43916 411 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 PSIP1O75475 530 aaKnown RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 EEDO75530 441 aaKnown RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 OR2J2O76002 312 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 KRT34O76011 436 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 MYO1DO94832 1006 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 VAPBO95292 243 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 NPPAP01160 153 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 STATHP02808 62 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 STAG3L2P0CL84 134 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 MPC1LP0DKB6 136 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 ERGP11308 486 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 GTF2E2P29084 291 aaKnown RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 HRH1P35367 487 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 OPRM1P35372 400 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 NAA10P41227 235 aaPredicted RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 CXCL5P42830 114 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 CCR6P51684 374 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 ZNF136P52737 540 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 TBPL1P62380 186 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 HMGCS1Q01581 520 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 STX4Q12846 297 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 RCAN2Q14206 197 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 C9orf135Q5VTT2 229 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 OPN5Q6U736 354 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 SCIMPQ6UWF3 145 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 C4orf22Q6V702 233 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 IQCF2Q8IXL9 164 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 SYCE1Q8N0S2 351 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 RPRMLQ8N4K4 120 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 KIF2BQ8N4N8 673 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 OR2M7Q8NG81 312 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 OR4A4PQ8NGN8 299 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 LKAAEAR1Q8TD35 194 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 GEMIN6Q8WXD5 167 aaKnown RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 TSLPQ969D9 159 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 JSRP1Q96MG2 331 aaPredicted RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 TSSK3Q96PN8 268 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 CCL19Q99731 98 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 FRMD8P1Q9BZ68 369 aaPredicted RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 TTTY12Q9BZ98 90 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 IL22Q9GZX6 179 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 CCNB1IP1Q9NPC3 277 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 MTCH1Q9NZJ7 389 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 ZMAT5Q9UDW3 170 aaKnown RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 ING4Q9UNL4 249 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 MMACHCQ9Y4U1 282 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 SDK2Q58EX2 2172 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 FLNCQ14315 2725 aa2.58□□□□□ -2
PTCH1-216ENST00000548379 SPENQ96T58 3664 aaKnown RBP2.58□□□□□ -2
PTCH1-216ENST00000548379 PIKFYVEQ9Y2I7 2098 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 KNTC1P50748 2209 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 CREBBPQ92793 2442 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 DOPEY1Q5JWR5 2465 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 A0A1W2PPV4 95 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 PRSS37A4D1T9 235 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 BTNL10A8MVZ5 291 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 MIF4GDA9UHW6 222 aaKnown RBP2.57□□□□□ -2
PTCH1-216ENST00000548379 ZNF879B4DU55 563 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 NIPSNAP2O75323 286 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 TRAPPC6AO75865 159 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 TGM6O95932 706 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 C8GP07360 202 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 OGNP20774 298 aaKnown RBP2.57□□□□□ -2
PTCH1-216ENST00000548379 HMOX2P30519 316 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 COILP38432 576 aaPredicted RBP2.57□□□□□ -2
PTCH1-216ENST00000548379 ANP32AP39687 249 aaKnown RBP2.57□□□□□ -2
PTCH1-216ENST00000548379 MARCKSL1P49006 195 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 TMED10P49755 219 aaKnown RBP2.57□□□□□ -2
PTCH1-216ENST00000548379 RAB8AP61006 207 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 STXBP1P61764 594 aaKnown RBP2.57□□□□□ -2
PTCH1-216ENST00000548379 BTN3A2P78410 334 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 BTG2P78543 158 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 BASP1P80723 227 aaKnown RBP2.57□□□□□ -2
PTCH1-216ENST00000548379 PON3Q15166 354 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 FBXL19-AS1Q494R0 122 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 ZBED5Q49AG3 693 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 ACSBG2Q5FVE4 666 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 C22orf42Q6IC83 251 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 DUX4L9Q6RFH8 374 aaPredicted RBP2.57□□□□□ -2
PTCH1-216ENST00000548379 SLC16A14Q7RTX9 510 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 VN1R4Q7Z5H5 301 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 TMEM251Q8N6I4 163 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 PRELID2Q8N945 189 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 Q8N9L7 120 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 MORN4Q8NDC4 146 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 DUSP18Q8NEJ0 188 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 TTLQ8NG68 377 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 OR5T3Q8NGG3 340 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 OR9G4Q8NGQ1 327 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 LINC01560Q8TB33 94 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 NT5CQ8TCD5 201 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 ANKRD7Q92527 254 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 RAB1CQ92928 201 aa2.57□□□□□ -2
PTCH1-216ENST00000548379 TMIGD2Q96BF3 282 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms