RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 CLEC18BQ6UXF7 455 aa17.85■□□□□ 0.45
RITA1-201ENST00000548278 KCTD9Q7L273 389 aa17.85■□□□□ 0.45
RITA1-201ENST00000548278 OR8H1Q8NGG4 311 aa17.85■□□□□ 0.45
RITA1-201ENST00000548278 FAM57AQ8TBR7 257 aa17.85■□□□□ 0.45
RITA1-201ENST00000548278 U3KQ87 197 aa17.85■□□□□ 0.45
RITA1-201ENST00000548278 TRAV14DV4A0A0A6YYC5 116 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 LRP5LA4QPB2 252 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 GFRA3O60609 400 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 ZNF474Q6S9Z5 364 aaPredicted RBP17.84■□□□□ 0.45
RITA1-201ENST00000548278 LINC00596Q86U02 117 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 FXYD6-FXYD2A0A087WZ82 144 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 RFPL4AA6NLU0 287 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 RFPL4AL1F8VTS6 287 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 PGAM2P15259 253 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 DUSP1P28562 367 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 IKZF1Q13422 519 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 TBR1Q16650 682 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 C3P1Q6ZMU1 363 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 FAM58AQ8N1B3 248 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 FAM169BQ8N8A8 192 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 FXYD6Q9H0Q3 95 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 SLC25A15Q9Y619 301 aa17.84■□□□□ 0.45
RITA1-201ENST00000548278 IGHV1-18A0A0C4DH31 117 aa17.83■□□□□ 0.45
RITA1-201ENST00000548278 K7ENP7 123 aa17.83■□□□□ 0.45
RITA1-201ENST00000548278 L7N2F9 121 aa17.83■□□□□ 0.45
RITA1-201ENST00000548278 GMFBP60983 142 aa17.83■□□□□ 0.45
RITA1-201ENST00000548278 LILRB4Q8NHJ6 448 aa17.83■□□□□ 0.45
RITA1-201ENST00000548278 ADAT1Q9BUB4 502 aaKnown RBP17.83■□□□□ 0.45
RITA1-201ENST00000548278 DPCDQ9BVM2 203 aaPredicted RBP17.83■□□□□ 0.45
RITA1-201ENST00000548278 AMDHD2Q9Y303 409 aa17.83■□□□□ 0.45
RITA1-201ENST00000548278 DMXL2Q8TDJ6 3036 aa17.83■□□□□ 0.45
RITA1-201ENST00000548278 DSPP15924 2871 aaKnown RBP17.83■□□□□ 0.44
RITA1-201ENST00000548278 A0A0B4J2A0 478 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 IGHV2OR16-5A0A0B4J2B6 119 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 ARPC5O15511 151 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 NOS1APO75052 506 aaPredicted RBP17.83■□□□□ 0.44
RITA1-201ENST00000548278 NAPSAO96009 420 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 CEACAM8P31997 349 aaPredicted RBP17.83■□□□□ 0.44
RITA1-201ENST00000548278 IL13RA2Q14627 380 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 OPCMLQ14982 345 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 SLC9A3R2Q15599 337 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 UNQ6126/PRO20091Q6UXV3 157 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 Q6ZS49 121 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 SCCPDHQ8NBX0 429 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 ZNF680Q8NEM1 530 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 SEC22AQ96IW7 307 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 PDCD10Q9BUL8 212 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 WDR13Q9H1Z4 485 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 RHOFQ9HBH0 211 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 SHPKQ9UHJ6 478 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 C14orf166Q9Y224 244 aaKnown RBP17.83■□□□□ 0.44
RITA1-201ENST00000548278 MSRB2Q9Y3D2 182 aa17.83■□□□□ 0.44
RITA1-201ENST00000548278 SHANK1Q9Y566 2161 aa17.82■□□□□ 0.44
RITA1-201ENST00000548278 C3orf80F5H4A9 247 aa17.82■□□□□ 0.44
RITA1-201ENST00000548278 ZNF205O95201 554 aa17.82■□□□□ 0.44
RITA1-201ENST00000548278 CTSDP07339 412 aaPredicted RBP17.82■□□□□ 0.44
RITA1-201ENST00000548278 TUBG1P23258 451 aa17.82■□□□□ 0.44
RITA1-201ENST00000548278 HTR2BP41595 481 aa17.82■□□□□ 0.44
RITA1-201ENST00000548278 DHRS9Q9BPW9 319 aa17.82■□□□□ 0.44
RITA1-201ENST00000548278 CLEC4MQ9H2X3 399 aaPredicted RBP17.82■□□□□ 0.44
RITA1-201ENST00000548278 TUBG2Q9NRH3 451 aa17.82■□□□□ 0.44
RITA1-201ENST00000548278 CEP295Q9C0D2 2601 aa17.82■□□□□ 0.44
RITA1-201ENST00000548278 M0R233 179 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 HOXD4P09016 255 aaPredicted RBP17.81■□□□□ 0.44
RITA1-201ENST00000548278 C4BPBP20851 252 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 FGL1Q08830 312 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 SRSF7Q16629 238 aaKnown RBP eCLIP17.81■□□□□ 0.44
RITA1-201ENST00000548278 ANKRD55Q3KP44 614 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 Q8NA96 180 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 SPACA1Q9HBV2 294 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 CHMP1AQ9HD42 196 aaPredicted RBP17.81■□□□□ 0.44
RITA1-201ENST00000548278 PURGQ9UJV8 347 aaKnown RBP17.81■□□□□ 0.44
RITA1-201ENST00000548278 FAM25EA8MYX2 175 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 H0YL77 283 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 KNG1P01042 644 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 TDGF1P3P51864 188 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 SUMF2Q8NBJ7 301 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 SFXN3Q9BWM7 321 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 BCL2L14Q9BZR8 327 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 Q9N2K0 584 aa17.81■□□□□ 0.44
RITA1-201ENST00000548278 BSNQ9UPA5 3926 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 TRAV24A0A0B4J272 114 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 SERPINF1P36955 418 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 ERVK11-1P61568 191 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 ZNF154Q13106 437 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 OR8G1Q15617 311 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 OR8G5Q8NG78 346 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 COQ8AQ8NI60 647 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 IFT22Q9H7X7 185 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 PRR13Q9NZ81 148 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 POLDIP2Q9Y2S7 368 aa17.8■□□□□ 0.44
RITA1-201ENST00000548278 HEATR1Q9H583 2144 aaKnown RBP17.8■□□□□ 0.44
RITA1-201ENST00000548278 HSPB6O14558 160 aa17.79■□□□□ 0.44
RITA1-201ENST00000548278 GLI4P10075 376 aa17.79■□□□□ 0.44
RITA1-201ENST00000548278 FCGR2CP31995 323 aa17.79■□□□□ 0.44
RITA1-201ENST00000548278 PPP1R1CQ8WVI7 109 aa17.79■□□□□ 0.44
RITA1-201ENST00000548278 GTF3AQ92664 365 aaKnown RBP17.79■□□□□ 0.44
RITA1-201ENST00000548278 TMEM100Q9NV29 134 aa17.79■□□□□ 0.44
RITA1-201ENST00000548278 TINAGQ9UJW2 476 aa17.79■□□□□ 0.44
RITA1-201ENST00000548278 MAP1BP46821 2468 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms