RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 GNPNAT1Q96EK6 184 aaPredicted RBP9.33□□□□□ -0.92
NPAS3-205ENST00000547068 KCNK17Q96T54 332 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 PLEKHJ1Q9NW61 149 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 GNG13Q9P2W3 67 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 ANXA10Q9UJ72 324 aa9.33□□□□□ -0.92
NPAS3-205ENST00000547068 NXT1Q9UKK6 140 aaKnown RBP9.33□□□□□ -0.92
NPAS3-205ENST00000547068 TMEM131Q92545 1883 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 IGHV1OR15-9A0A0B4J2B8 117 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 IGKV1-9A0A0C4DH69 117 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 CCDC163A0A0D9SF12 145 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 ZNF850A8MQ14 1090 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 JMJD7P0C870 316 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 P2RY6Q15077 328 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 PPA1Q15181 289 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 KISS1Q15726 138 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 COA6Q5JTJ3 125 aaKnown RBP9.32□□□□□ -0.92
NPAS3-205ENST00000547068 TEX38Q6PEX7 206 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
NPAS3-205ENST00000547068 SLC38A9Q8NBW4 561 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 NOXO1Q8NFA2 376 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 OR8B12Q8NGG6 310 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 OR5L2Q8NGL0 311 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 OR4D5Q8NGN0 318 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 OR5C1Q8NGR4 320 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 PATE1Q8WXA2 126 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 OR8D2Q9GZM6 311 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 MOB1AQ9H8S9 216 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 CALHM2Q9HA72 323 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 ELL3Q9HB65 397 aaPredicted RBP9.32□□□□□ -0.92
NPAS3-205ENST00000547068 SDF2L1Q9HCN8 221 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 MED29Q9NX70 200 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 V9GYS6 101 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 ZNF732B4DXR9 585 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 ONECUT2O95948 504 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 CRYABP02511 175 aaKnown RBP9.32□□□□□ -0.92
NPAS3-205ENST00000547068 THEGLP0DJG4 465 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 ZNF17P17021 662 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 EPHA1P21709 976 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 DAP3P51398 398 aaKnown RBP9.32□□□□□ -0.92
NPAS3-205ENST00000547068 RUNX1Q01196 453 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 PMS2P11Q13670 270 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 HERPUD1Q15011 391 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 KIAA0895LQ68EN5 471 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 ZNF66Q6ZN08 573 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 ZNF283Q8N7M2 679 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 DNASE2BQ8WZ79 361 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 TMEM18Q96B42 140 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 MSI2Q96DH6 328 aaKnown RBP9.32□□□□□ -0.92
NPAS3-205ENST00000547068 GAL3ST4Q96RP7 486 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 CTDSP1Q9GZU7 261 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 OPN3Q9H1Y3 402 aaPredicted RBP9.32□□□□□ -0.92
NPAS3-205ENST00000547068 PLEKHF2Q9H8W4 249 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 SLC2A9Q9NRM0 540 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 LRFN1Q9P244 771 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 MYOTQ9UBF9 498 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 POLR1DQ9Y2S0 133 aa9.32□□□□□ -0.92
NPAS3-205ENST00000547068 A6NCN8 305 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 ZFP92A6NM28 416 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 MS4A18H0YCH9 400 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 PHF1O43189 567 aaPredicted RBP9.31□□□□□ -0.92
NPAS3-205ENST00000547068 RPLP1P05386 114 aaKnown RBP9.31□□□□□ -0.92
NPAS3-205ENST00000547068 FGF5P12034 268 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 TUBG1P23258 451 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 IL12BP29460 328 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 CCR5P51681 352 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 POU3F1Q03052 451 aaPredicted RBP9.31□□□□□ -0.92
NPAS3-205ENST00000547068 ZFP36L1Q07352 338 aaKnown RBP9.31□□□□□ -0.92
NPAS3-205ENST00000547068 GAGE1Q13065 139 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 CLN3Q13286 438 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 MS4A18Q3C1V0 323 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 CDCP2Q5VXM1 449 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 OOSP2Q86WS3 158 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 FAM185AQ8N0U4 392 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 TMEM105Q8N8V8 129 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 SUMF1Q8NBK3 374 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 GPR119Q8TDV5 335 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 TBL1XR1Q9BZK7 514 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 GPR173Q9NS66 373 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 NECAP2Q9NVZ3 263 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 ZNF319Q9P2F9 582 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 H0Y8X5 98 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 CA11O75493 328 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 MMP9P14780 707 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 HNRNPA2B1P22626 353 aaKnown RBP9.31□□□□□ -0.92
NPAS3-205ENST00000547068 GALNSP34059 522 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 RRADP55042 308 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 ZNF121P58317 390 aaPredicted RBP9.31□□□□□ -0.92
NPAS3-205ENST00000547068 WDR25Q64LD2 544 aaPredicted RBP9.31□□□□□ -0.92
NPAS3-205ENST00000547068 MEX3BQ6ZN04 569 aaKnown RBP9.31□□□□□ -0.92
NPAS3-205ENST00000547068 METTL27Q8N6F8 245 aaPredicted RBP9.31□□□□□ -0.92
NPAS3-205ENST00000547068 TMEM252Q8N6L7 170 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 CADM4Q8NFZ8 388 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 OR2AJ1Q8NGZ0 328 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 SSC4DQ8WTU2 575 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 ACY3Q96HD9 319 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 PCED1AQ9H1Q7 454 aa9.31□□□□□ -0.92
NPAS3-205ENST00000547068 PNO1Q9NRX1 252 aaKnown RBP9.31□□□□□ -0.92
NPAS3-205ENST00000547068 BLACEA4D250 179 aa9.3□□□□□ -0.92
NPAS3-205ENST00000547068 A6NNC1 897 aa9.3□□□□□ -0.92
NPAS3-205ENST00000547068 M0QZK8 103 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms