RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 RPRMLQ8N4K4 120 aa10.93□□□□□ -0.66
SCAF11-209ENST00000547018 RTN4IP1Q8WWV3 396 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-209ENST00000547018 ST8SIA2Q92186 375 aa10.93□□□□□ -0.66
SCAF11-209ENST00000547018 RRNAD1Q96FB5 475 aaKnown RBP10.93□□□□□ -0.66
SCAF11-209ENST00000547018 IP6K3Q96PC2 410 aa10.93□□□□□ -0.66
SCAF11-209ENST00000547018 ALX4Q9H161 411 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-209ENST00000547018 OPN3Q9H1Y3 402 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-209ENST00000547018 SFT2D2O95562 160 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 FUT3P21217 361 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 OMGP23515 440 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 ZNF133P52736 654 aaPredicted RBP10.92□□□□□ -0.66
SCAF11-209ENST00000547018 RNPS1Q15287 305 aaKnown RBP10.92□□□□□ -0.66
SCAF11-209ENST00000547018 FAM189A2Q15884 450 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 LYZL2Q7Z4W2 148 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 SSC4DQ8WTU2 575 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 WNT2BQ93097 391 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 H0YIZ8 118 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 H0YL77 283 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 IGHV3-13P01766 116 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 IGHV3-7P01780 117 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 EPHA1P21709 976 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 AADACP22760 399 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 NUP62P37198 522 aaPredicted RBP10.92□□□□□ -0.66
SCAF11-209ENST00000547018 GLP1RP43220 463 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 LRBAP50851 2863 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 RBM11P57052 281 aaKnown RBP10.92□□□□□ -0.66
SCAF11-209ENST00000547018 SPG11Q96JI7 2443 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 POM121L2Q96KW2 1035 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 C1QTNF5Q9BXJ0 243 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 MAGT1Q9H0U3 335 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 ZNF286AQ9HBT8 521 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 ASF1BQ9NVP2 202 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 SDHAF2Q9NX18 166 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 TREM2Q9NZC2 230 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 GHRLQ9UBU3 117 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 PDCD6O75340 191 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 CRHP06850 196 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 TPRX1Q8N7U7 411 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 OR51H1Q8NH63 302 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 REPIN1Q9BWE0 567 aaKnown RBP10.92□□□□□ -0.66
SCAF11-209ENST00000547018 ASCL3Q9NQ33 180 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.92□□□□□ -0.66
SCAF11-209ENST00000547018 NECAP2Q9NVZ3 263 aa10.92□□□□□ -0.66
SCAF11-209ENST00000547018 LOC105371267A0A1B0GV96 52 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 IFNA2P01563 188 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 APOC3P02656 99 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 NMBP08949 121 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 FPR2P25090 351 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 MPGP29372 298 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 CBX5P45973 191 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 MECP2P51608 486 aaKnown RBP10.91□□□□□ -0.66
SCAF11-209ENST00000547018 IZUMO4Q1ZYL8 232 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 C9orf106Q8NAJ2 232 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 SLC25A40Q8TBP6 338 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 TMEM231Q9H6L2 316 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 TAS2R3Q9NYW6 316 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 PFDN2Q9UHV9 154 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 PIEZO1Q92508 2521 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 CACNA1BQ00975 2339 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 IGKV3D-15A0A087WSY6 115 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 IGHV1-2P23083 117 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 ARR3P36575 388 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 TAS2R31P59538 309 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 AANATQ16613 207 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 CCDC28AQ8IWP9 274 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 PDZD9Q8IXQ8 264 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 SLC38A6Q8IZM9 456 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 OR1K1Q8NGR3 316 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 OR1S1Q8NH92 325 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 CPNE2Q96FN4 548 aaPredicted RBP10.91□□□□□ -0.66
SCAF11-209ENST00000547018 NARFLQ9H6Q4 476 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 C12orf4Q9NQ89 552 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 WNK2Q9Y3S1 2297 aa10.91□□□□□ -0.66
SCAF11-209ENST00000547018 RNF222A6NCQ9 220 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 B8ZZF3 427 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 LINC01387J3KSC0 135 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 CNOT4O95628 575 aaKnown RBP10.9□□□□□ -0.66
SCAF11-209ENST00000547018 ACTL6AO96019 429 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 TGFBR3Q03167 851 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 FGL1Q08830 312 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 OR8B8Q15620 311 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 VAX1Q5SQQ9 334 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 OR2A2Q6IF42 318 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 ZNF565Q8N9K5 539 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 RNASE11Q8TAA1 199 aaKnown RBP10.9□□□□□ -0.66
SCAF11-209ENST00000547018 LINC00052Q96N35 136 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 SCGB3A2Q96PL1 93 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 SLC2A8Q9NY64 477 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 OSGIN2Q9Y236 505 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 LRP3O75074 770 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 DEFA5Q01523 94 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 TBC1D28Q2M2D7 210 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 OR2B11Q5JQS5 317 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 FAM53AQ6NSI3 398 aaPredicted RBP10.9□□□□□ -0.66
SCAF11-209ENST00000547018 TMEM185AQ8NFB2 350 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 TAAR6Q96RI8 345 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 KCNIP3Q9Y2W7 256 aa10.9□□□□□ -0.66
SCAF11-209ENST00000547018 UBE2J1Q9Y385 318 aaPredicted RBP10.9□□□□□ -0.66
SCAF11-209ENST00000547018 WNT9BO14905 357 aa10.9□□□□□ -0.67
SCAF11-209ENST00000547018 NXPH2O95156 264 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms