RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 IFT22Q9H7X7 185 aa11.95□□□□□ -0.5
DDX54-203ENST00000546869 EXOSC4Q9NPD3 245 aaKnown RBP11.95□□□□□ -0.5
DDX54-203ENST00000546869 IL36RNQ9UBH0 155 aa11.95□□□□□ -0.5
DDX54-203ENST00000546869 ING4Q9UNL4 249 aa11.95□□□□□ -0.5
DDX54-203ENST00000546869 GSTK1Q9Y2Q3 226 aa11.95□□□□□ -0.5
DDX54-203ENST00000546869 NF1P21359 2839 aa11.95□□□□□ -0.5
DDX54-203ENST00000546869 TRAV1-2A0A0B4J238 106 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 A0A0G2JK05 382 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 TMEM82A0PJX8 343 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 CDRT1O95170 752 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 OR2H2O95918 312 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 CSTBP04080 98 aaKnown RBP11.94□□□□□ -0.5
DDX54-203ENST00000546869 UBBP0CG47 229 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 MMP9P14780 707 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 ERP29P30040 261 aaKnown RBP11.94□□□□□ -0.5
DDX54-203ENST00000546869 CAPZA1P52907 286 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 BPIFB3P59826 476 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 GLIPR1L1Q6UWM5 242 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 OSR2Q8N2R0 312 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 MUL1Q969V5 352 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 C1orf147Q96MC9 270 aaPredicted RBP11.94□□□□□ -0.5
DDX54-203ENST00000546869 WDFY2Q96P53 400 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 FAM192AQ9GZU8 254 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 SIRPDQ9H106 197 aa11.94□□□□□ -0.5
DDX54-203ENST00000546869 MRPS28Q9Y2Q9 187 aaKnown RBP11.94□□□□□ -0.5
DDX54-203ENST00000546869 A0A1W2PPH5 198 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 M0R1W7 72 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 MGST3O14880 152 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 DEGS1O15121 323 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 PSPNO60542 156 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 HTR3BO95264 441 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 CSN2P05814 226 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 GTF2F2P13984 249 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 JUNBP17275 347 aaPredicted RBP11.93□□□□□ -0.5
DDX54-203ENST00000546869 DUSP1P28562 367 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 SRP14P37108 136 aaKnown RBP11.93□□□□□ -0.5
DDX54-203ENST00000546869 PAX5Q02548 391 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 MEF2CQ06413 473 aaPredicted RBP11.93□□□□□ -0.5
DDX54-203ENST00000546869 CMTM4Q8IZR5 234 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 ASCC1Q8N9N2 400 aaKnown RBP11.93□□□□□ -0.5
DDX54-203ENST00000546869 OR4D6Q8NGJ1 314 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 H1FXQ92522 213 aaKnown RBP11.93□□□□□ -0.5
DDX54-203ENST00000546869 NCOR1P1Q9H4R4 102 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 UNKLQ9H9P5 680 aaKnown RBP11.93□□□□□ -0.5
DDX54-203ENST00000546869 ELL3Q9HB65 397 aaPredicted RBP11.93□□□□□ -0.5
DDX54-203ENST00000546869 VCX3AQ9NNX9 186 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 ARHGAP32A7KAX9 2087 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 DOCK11Q5JSL3 2073 aa11.93□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A10PA6NDY2 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A18PA6NE21 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A16PA6NEW6 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A20PA6NIJ5 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A8PA6NJQ4 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A7PA6NKC0 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A22PA8MWA6 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A12PA8MX19 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A5PA8MXJ8 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A23PA8MXZ1 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 SLC22A1O15245 554 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 TOX4O94842 621 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A15PP0C7V4 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A13PP0C7W8 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A14PP0C7W9 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 FAM90A24PP0C7X0 464 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 CALCBP10092 127 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 CALRP27797 417 aaKnown RBP11.92□□□□□ -0.5
DDX54-203ENST00000546869 RBM11P57052 281 aaKnown RBP11.92□□□□□ -0.5
DDX54-203ENST00000546869 ARF6P62330 175 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 RPL31P62899 125 aaKnown RBP11.92□□□□□ -0.5
DDX54-203ENST00000546869 PDCD1Q15116 288 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 TUSC1Q2TAM9 212 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 METTL11BQ5VVY1 283 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 AWAT2Q6E213 333 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 METAP1DQ6UB28 335 aaPredicted RBP11.92□□□□□ -0.5
DDX54-203ENST00000546869 IL17RELQ6ZVW7 336 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 GDPD3Q7L5L3 318 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 OR6M1Q8NGM8 313 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 OR10K1Q8NGX5 313 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 C19orf12Q9NSK7 152 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 STUB1Q9UNE7 303 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 ST3GAL6Q9Y274 331 aa11.92□□□□□ -0.5
DDX54-203ENST00000546869 ANK3Q12955 4377 aaKnown RBP11.91□□□□□ -0.5
DDX54-203ENST00000546869 FUOMA2VDF0 154 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 H3BUI4 141 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 SLC33A1O00400 549 aaPredicted RBP11.91□□□□□ -0.5
DDX54-203ENST00000546869 SLC17A2O00624 439 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 PDCD5O14737 125 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 IFNA2P01563 188 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 ZNF44P15621 663 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 GABRR1P24046 479 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 CFPP27918 469 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 HTR2CP28335 458 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 OR3A1P47881 315 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 KCNJ3P48549 501 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 GRK1Q15835 563 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 NEDD8Q15843 81 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 MPV17LQ2QL34 196 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 SLC22A6Q4U2R8 563 aa11.91□□□□□ -0.5
DDX54-203ENST00000546869 KLF17Q5JT82 389 aaPredicted RBP11.91□□□□□ -0.5
DDX54-203ENST00000546869 TMEM200BQ69YZ2 307 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms