RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ST8SIA3O43173 380 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 PHF1O43189 567 aaPredicted RBP13.18□□□□□ -0.3
CNN3-207ENST00000545882 IFNA4P05014 189 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 GLAP06280 429 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 NPBWR2P48146 333 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 CAMLGP49069 296 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 MEOX2P50222 304 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 HMGN3Q15651 99 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 AWAT1Q58HT5 328 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 ABLIM2Q6H8Q1 611 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 TMEM211Q6ICI0 200 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 SLC35G3Q8N808 338 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 PIGCQ92535 297 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 IP6K3Q96PC2 410 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 USB1Q9BQ65 265 aaKnown RBP13.18□□□□□ -0.3
CNN3-207ENST00000545882 RPS10P5Q9NQ39 176 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 P4HTMQ9NXG6 502 aa13.18□□□□□ -0.3
CNN3-207ENST00000545882 MED19A0JLT2 244 aaPredicted RBP13.17□□□□□ -0.3
CNN3-207ENST00000545882 C7orf77A4D0Y5 90 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 TCN2P20062 427 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 ASCL1P50553 236 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 MALLQ13021 153 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 IGSF11Q5DX21 431 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 FREM1Q5H8C1 2179 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 PLCXD3Q63HM9 321 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 BATF2Q8N1L9 274 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 KDF1Q8NAX2 398 aaPredicted RBP13.17□□□□□ -0.3
CNN3-207ENST00000545882 HSD17B11Q8NBQ5 300 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 OR14L1PQ8NHC6 308 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 KCNE4Q8WWG9 221 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 DOCK10Q96BY6 2186 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 SYT3Q9BQG1 590 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 SPACA1Q9HBV2 294 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 GPR35Q9HC97 309 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 LUZP4Q9P127 313 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 RFNGQ9Y644 331 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 LRRC3CA6NJW4 275 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 C9J4A7 227 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 EIF3GO75821 320 aaKnown RBP eCLIP13.17□□□□□ -0.3
CNN3-207ENST00000545882 PPYP01298 95 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 CFIP05156 583 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 SNRNP70P08621 437 aaKnown RBP13.17□□□□□ -0.3
CNN3-207ENST00000545882 MMP7P09237 267 aaPredicted RBP13.17□□□□□ -0.3
CNN3-207ENST00000545882 PTAFRP25105 342 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 SNRPEP62304 92 aaKnown RBP13.17□□□□□ -0.3
CNN3-207ENST00000545882 ZFP36L1Q07352 338 aaKnown RBP13.17□□□□□ -0.3
CNN3-207ENST00000545882 Q0VFX4 171 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 BOD1Q96IK1 185 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 RGCCQ9H4X1 137 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 ZNF391Q9UJN7 358 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 SLC7A11Q9UPY5 501 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 TMED3Q9Y3Q3 217 aa13.17□□□□□ -0.3
CNN3-207ENST00000545882 NKX2-6A6NCS4 301 aa13.16□□□□□ -0.3
CNN3-207ENST00000545882 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
CNN3-207ENST00000545882 ACAA1P09110 424 aaPredicted RBP13.16□□□□□ -0.3
CNN3-207ENST00000545882 DAOP14920 347 aa13.16□□□□□ -0.3
CNN3-207ENST00000545882 ZNF44P15621 663 aa13.16□□□□□ -0.3
CNN3-207ENST00000545882 FUT3P21217 361 aa13.16□□□□□ -0.3
CNN3-207ENST00000545882 PMELP40967 661 aa13.16□□□□□ -0.3
CNN3-207ENST00000545882 TRA2AQ13595 282 aaKnown RBP eCLIP13.16□□□□□ -0.3
CNN3-207ENST00000545882 TGIF1Q15583 401 aa13.16□□□□□ -0.3
CNN3-207ENST00000545882 MEX3BQ6ZN04 569 aaKnown RBP13.16□□□□□ -0.3
CNN3-207ENST00000545882 CCDC71LQ8N9Z2 235 aa13.16□□□□□ -0.3
CNN3-207ENST00000545882 CPEB3Q8NE35 698 aaKnown RBP13.16□□□□□ -0.3
CNN3-207ENST00000545882 OR10D3Q8NH80 312 aa13.16□□□□□ -0.3
CNN3-207ENST00000545882 SPSB4Q96A44 273 aa13.16□□□□□ -0.3
CNN3-207ENST00000545882 FGF23Q9GZV9 251 aaPredicted RBP13.16□□□□□ -0.3
CNN3-207ENST00000545882 PRDM6Q9NQX0 595 aa13.16□□□□□ -0.3
CNN3-207ENST00000545882 COLQQ9Y215 455 aaPredicted RBP13.16□□□□□ -0.3
CNN3-207ENST00000545882 STRAPQ9Y3F4 350 aaKnown RBP13.16□□□□□ -0.3
CNN3-207ENST00000545882 COL27A1Q8IZC6 1860 aaPredicted RBP13.16□□□□□ -0.3
CNN3-207ENST00000545882 ZNF816-ZNF321PA0A0X1KG74 233 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 C3orf85A0A1B0GTC6 90 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 FAM24AA6NFZ4 105 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 PATE3B3GLJ2 98 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 TRDCB7Z8K6 153 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 K7N7A8 449 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 MPPED1O15442 326 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 GNRHRP30968 328 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 PPP1CCP36873 323 aaKnown RBP13.15□□□□□ -0.3
CNN3-207ENST00000545882 GLP1RP43220 463 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 RAB5BP61020 215 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 HERV-K104P61576 105 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 EWSR1Q01844 656 aaKnown RBP eCLIP13.15□□□□□ -0.3
CNN3-207ENST00000545882 RNF212Q495C1 297 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 WIPI1Q5MNZ9 446 aaPredicted RBP13.15□□□□□ -0.3
CNN3-207ENST00000545882 ZNF611Q8N823 705 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 Q8NFD4 153 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 OR2V1Q8NHB1 315 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 SGCZQ96LD1 299 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 GUCD1Q96NT3 240 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 C20orf24Q9BUV8 137 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 EIF5A2Q9GZV4 153 aaKnown RBP13.15□□□□□ -0.3
CNN3-207ENST00000545882 ZNF442Q9H7R0 627 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 DEPPQ9NTK1 212 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 CRIM1Q9NZV1 1036 aa13.15□□□□□ -0.3
CNN3-207ENST00000545882 FBXO9Q9UK97 447 aaPredicted RBP13.15□□□□□ -0.3
CNN3-207ENST00000545882 TNRC6AQ8NDV7 1962 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms