RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 EDDM3BP56851 147 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ADARB1P78563 741 aaKnown RBP10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 KISS1Q15726 138 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 LY6EQ16553 131 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZSCAN26Q16670 478 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 BRICD5Q6PL45 260 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SERPINA12Q8IW75 414 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR5D18Q8NGL1 313 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR5AK2Q8NH90 309 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZNF714Q96N38 554 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 MYCBPQ99417 103 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 PPA2Q9H2U2 334 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 GSTK1Q9Y2Q3 226 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 LINC00312Q9Y6C7 94 aa10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SIRT4Q9Y6E7 314 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-215ENST00000543359 A0A0G2JK05 382 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SIRPB1O00241 398 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 MGST3O14880 152 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 WIPF1O43516 503 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SULT1B1O43704 296 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RPSAP08865 295 aaKnown RBP10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 CCDC159P0C7I6 412 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 KIR2DS4P43632 304 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RAB13P51153 203 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 GBX2P52951 348 aaPredicted RBP10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SNU13P55769 128 aaKnown RBP10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 P2RX3P56373 397 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 IL18R1Q13478 541 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 EDDM3AQ14507 147 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 CDK5R1Q15078 307 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 CCBE1Q6UXH8 406 aaPredicted RBP10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 ZNF485Q8NCK3 441 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 Q8NFD4 153 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR51A2Q8NGJ7 313 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR5D14Q8NGL3 314 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 OR13D1Q8NGV5 346 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 CNIH3Q8TBE1 160 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 CORO2AQ92828 525 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 MALSU1Q96EH3 234 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 RHOFQ9HBH0 211 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SIGLEC9Q9Y336 463 aa10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 TBL2Q9Y4P3 447 aaKnown RBP10.59□□□□□ -0.71
TNFRSF1A-215ENST00000543359 SH2D1BO14796 132 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OGG1O15527 345 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 KCNAB3O43448 404 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 LALBAP00709 142 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ARG1P05089 322 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 DCKP27707 260 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 EFNB2P52799 333 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 LGALS4P56470 323 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CCDC58Q4VC31 144 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ELP2Q6IA86 826 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 LAIR2Q6ISS4 152 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 RPL22L1Q6P5R6 122 aaKnown RBP10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 BAIAP2L2Q6UXY1 529 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ASCL4Q6XD76 172 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ZNF555Q8NEP9 628 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 HAVCR2Q8TDQ0 301 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 COQ2Q96H96 371 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 EXOSC4Q9NPD3 245 aaKnown RBP10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CLEC2DQ9UHP7 191 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 DHDHQ9UQ10 334 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 UBE2J1Q9Y385 318 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 SESN1Q9Y6P5 492 aa10.58□□□□□ -0.72
TNFRSF1A-215ENST00000543359 IGHV2-26A0A0B4J1V2 119 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 A6NDX4 124 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 SLC33A1O00400 549 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CSN2P05814 226 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CGB3P0DN86 165 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 CGB7P0DN87 165 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 JUNBP17275 347 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GABRA5P31644 462 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GDNFP39905 211 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GLIPR1P48060 266 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 DYNLT3P51808 116 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 AESQ08117 197 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 SSX2Q16385 188 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 LRRC36Q1X8D7 754 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OR2G6Q5TZ20 316 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 PACRGLQ8N7B6 248 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 PXT1Q8NFP0 134 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TMEM133Q9H2Q1 129 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TCF7L1Q9HCS4 588 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 BABAM2Q9NXR7 383 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GLS2Q9UI32 602 aa10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 DIMT1Q9UNQ2 313 aaKnown RBP10.57□□□□□ -0.72
TNFRSF1A-215ENST00000543359 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 ODAMA1E959 279 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 FAM90A22PA8MWA6 464 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 M0QZ24 198 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TIMM23O14925 209 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 HCKP08631 526 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 GNAO1P09471 354 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OCM2P0CE71 109 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 OCMP0CE72 109 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 TMEM225BP0DP42 221 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 SOX2P48431 317 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 MTNR1BP49286 362 aa10.56□□□□□ -0.72
TNFRSF1A-215ENST00000543359 DOC2BQ14184 412 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms