RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 ZNF273Q14593 569 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 GRK1Q15835 563 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 SATL1Q86VE3 508 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 PDZD9Q8IXQ8 264 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 PIP4P2Q8N4L2 257 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 TMEM86BQ8N661 226 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 CHST4Q8NCG5 386 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 TNFAIP8L1Q8WVP5 186 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 DUX5Q96PT3 197 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 OR14A2Q96R54 314 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 DUSP21Q9H596 190 aa13.31□□□□□ -0.28
CIT-212ENST00000543239 PAK1IP1Q9NWT1 392 aaPredicted RBP13.31□□□□□ -0.28
CIT-212ENST00000543239 TRBV5-7A0A0A0MS05 114 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 A0A0U1RQK1 487 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 PNMA8CA0A1B0GUJ8 204 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 TMEM89A2RUT3 159 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 NPFFO15130 113 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 HOXA3O43365 443 aaPredicted RBP13.3□□□□□ -0.28
CIT-212ENST00000543239 PSPNO60542 156 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 OR2H2O95918 312 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 RBP4P02753 201 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 MELTFP08582 738 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 CALCBP10092 127 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 LMO1P25800 156 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 MAPK3P27361 379 aaPredicted RBP13.3□□□□□ -0.28
CIT-212ENST00000543239 ERP29P30040 261 aaKnown RBP13.3□□□□□ -0.28
CIT-212ENST00000543239 ZNF93P35789 620 aaPredicted RBP13.3□□□□□ -0.28
CIT-212ENST00000543239 OR3A1P47881 315 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 COMPP49747 757 aaPredicted RBP13.3□□□□□ -0.28
CIT-212ENST00000543239 KLRD1Q13241 179 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 DOC2BQ14184 412 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 IRF3Q14653 427 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 DDI2Q5TDH0 399 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 ASCL4Q6XD76 172 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 LDLRAD3Q86YD5 345 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 C11orf42Q8N5U0 333 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 Q8NFD4 153 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 SSMEM1Q8WWF3 244 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 GCDHQ92947 438 aaPredicted RBP13.3□□□□□ -0.28
CIT-212ENST00000543239 HEXA-AS1Q9H8Q6 139 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 RAB26Q9ULW5 256 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 LSM2Q9Y333 95 aaKnown RBP13.3□□□□□ -0.28
CIT-212ENST00000543239 SF3B6Q9Y3B4 125 aaKnown RBP13.3□□□□□ -0.28
CIT-212ENST00000543239 FAM96BQ9Y3D0 163 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 POMT1Q9Y6A1 747 aa13.3□□□□□ -0.28
CIT-212ENST00000543239 hADV38S2A0JD32 116 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 C17orf98A8MV24 154 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 SIRPB1O00241 398 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 FBP1P09467 338 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 ZNF728P0DKX0 622 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 CCL3L1P16619 93 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 CRHBPP24387 322 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 VHLP40337 213 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 PTGFRP43088 359 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 DLX1P56177 255 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 DLX6P56179 175 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 ERVFRD-1P60508 538 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 EDDM3AQ14507 147 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 SPHARQ15513 63 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 MIDNQ504T8 468 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 HCP5Q6MZN7 132 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 MS4A15Q8N5U1 240 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 OR4S1Q8NGB4 309 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 OR51T1Q8NGJ9 327 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 ORAI1Q96D31 301 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 DERL3Q96Q80 235 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 FAM192AQ9GZU8 254 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 CHST6Q9GZX3 395 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 IL36GQ9NZH8 169 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 FOXJ3Q9UPW0 622 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 LINC00312Q9Y6C7 94 aa13.29□□□□□ -0.28
CIT-212ENST00000543239 TRAV8-7A0A075B6U6 113 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 FUOMA2VDF0 154 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 RGS10O43665 173 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 CSN2P05814 226 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 ZNF44P15621 663 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 SAA4P35542 130 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 TGFBR2P37173 567 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 OR3A4PP47883 348 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 P2RX3P56373 397 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 PRB3Q04118 309 aaPredicted RBP13.28□□□□□ -0.28
CIT-212ENST00000543239 IL13RA2Q14627 380 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 RSU1Q15404 277 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 Q6P435 159 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 C16orf87Q6PH81 154 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 SGCDQ92629 289 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 ZNF714Q96N38 554 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 OR5M11Q96RB7 305 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 ZNF184Q99676 751 aaPredicted RBP13.28□□□□□ -0.28
CIT-212ENST00000543239 ZNRD1Q9P1U0 126 aa13.28□□□□□ -0.28
CIT-212ENST00000543239 A0A0G2JK05 382 aa13.27□□□□□ -0.29
CIT-212ENST00000543239 MEIOCA2RUB1 952 aa13.27□□□□□ -0.29
CIT-212ENST00000543239 ZNF780AO75290 641 aaPredicted RBP13.27□□□□□ -0.29
CIT-212ENST00000543239 HKR1P10072 659 aa13.27□□□□□ -0.29
CIT-212ENST00000543239 GPR50Q13585 617 aa13.27□□□□□ -0.29
CIT-212ENST00000543239 MED22Q15528 200 aa13.27□□□□□ -0.29
CIT-212ENST00000543239 NHLRC3Q5JS37 347 aa13.27□□□□□ -0.29
CIT-212ENST00000543239 RBM48Q5RL73 367 aaKnown RBP13.27□□□□□ -0.29
CIT-212ENST00000543239 C12orf54Q6X4T0 127 aa13.27□□□□□ -0.29
CIT-212ENST00000543239 TCF23Q7RTU1 214 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms