RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 MMP24Q9Y5R2 645 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 C3orf85A0A1B0GTC6 90 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 IGSF23A1L1A6 192 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 ZNF727A8MUV8 499 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 TERTO14746 1132 aaKnown RBP11.2□□□□□ -0.62
DDX11-223ENST00000542838 YIF1AO95070 293 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 VAMP5O95183 116 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 NRASP01111 189 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 CRYGSP22914 178 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 NKX2-1P43699 371 aaPredicted RBP11.2□□□□□ -0.62
DDX11-223ENST00000542838 FAM27BQ5VT28 67 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 ZNF774Q6NX45 483 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 BCL2L14Q9BZR8 327 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 TOLLIPQ9H0E2 274 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 ZNF700Q9H0M5 742 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 FOXD3Q9UJU5 478 aaPredicted RBP11.2□□□□□ -0.62
DDX11-223ENST00000542838 RARRES3Q9UL19 164 aa11.2□□□□□ -0.62
DDX11-223ENST00000542838 ZNF724A8MTY0 619 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 TRDCB7Z8K6 153 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 MALLQ13021 153 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 RAB35Q15286 201 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 HAGHQ16775 308 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 HIKESHIQ53FT3 197 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 SPSB3Q6PJ21 355 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 ASCL4Q6XD76 172 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 MUCL1Q96DR8 90 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 H3BQ15 152 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 MPPED1O15442 326 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 TAGLN2P37802 199 aaKnown RBP11.19□□□□□ -0.62
DDX11-223ENST00000542838 RND3P61587 244 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 RAB39BQ96DA2 213 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 JSRP1Q96MG2 331 aaPredicted RBP11.19□□□□□ -0.62
DDX11-223ENST00000542838 GGACTQ9BVM4 153 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 ZNF442Q9H7R0 627 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 UNKLQ9H9P5 680 aaKnown RBP11.19□□□□□ -0.62
DDX11-223ENST00000542838 CA14Q9ULX7 337 aa11.19□□□□□ -0.62
DDX11-223ENST00000542838 A0A087WZY1 265 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 SYNGR3O43761 229 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 PDCD6O75340 191 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 PITX3O75364 302 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 CDS2O95674 445 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 PPYP01298 95 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 HOXA5P20719 270 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 HTR5AP47898 357 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 NDUFA6P56556 154 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 MRPS34P82930 218 aaKnown RBP11.18□□□□□ -0.62
DDX11-223ENST00000542838 ZIC4Q8N9L1 334 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 MAGT1Q9H0U3 335 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 C11orf1Q9H5F2 150 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 UBE2J1Q9Y385 318 aaPredicted RBP11.18□□□□□ -0.62
DDX11-223ENST00000542838 G3V3Y1 287 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 HSPA12AO43301 675 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 SSSCA1O60232 199 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 CELA2AP08217 269 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 FBP1P09467 338 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 RD3LP0DJH9 198 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 TCN2P20062 427 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 UBE2KP61086 200 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 Q6ZPA2 131 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 ZNF695Q8IW36 515 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 BATF2Q8N1L9 274 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 OR1F12Q8NHA8 337 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 TMEM171Q8WVE6 324 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 INTS12Q96CB8 462 aaKnown RBP11.18□□□□□ -0.62
DDX11-223ENST00000542838 PAPOLGQ9BWT3 736 aaKnown RBP11.18□□□□□ -0.62
DDX11-223ENST00000542838 PLEKHF2Q9H8W4 249 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 AKIRIN1Q9H9L7 192 aaPredicted RBP11.18□□□□□ -0.62
DDX11-223ENST00000542838 LIPGQ9Y5X9 500 aa11.18□□□□□ -0.62
DDX11-223ENST00000542838 TNFSF11O14788 317 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 TOX3O15405 576 aaPredicted RBP11.17□□□□□ -0.62
DDX11-223ENST00000542838 SRP19P09132 144 aaKnown RBP11.17□□□□□ -0.62
DDX11-223ENST00000542838 PATE4P0C8F1 98 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 VAMP2P63027 116 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 ZNF674Q2M3X9 581 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 SPIN3Q5JUX0 258 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 ZNF385CQ66K41 422 aaPredicted RBP11.17□□□□□ -0.62
DDX11-223ENST00000542838 SLC25A31Q9H0C2 315 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 TMEM222Q9H0R3 208 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 PCED1AQ9H1Q7 454 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 SLC7A11Q9UPY5 501 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 H0YL77 283 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 SRPXP78539 464 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 ZNF343Q6P1L6 599 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 DPPA2Q7Z7J5 298 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 TMEM252Q8N6L7 170 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 OR5C1Q8NGR4 320 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 KIAA1456Q9P272 454 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 DKKL1Q9UK85 242 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 A0A0J9YW62 118 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 BTBD17A6NE02 478 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 HSD17B6O14756 317 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 OR7C1O76099 320 aaPredicted RBP11.17□□□□□ -0.62
DDX11-223ENST00000542838 TMEM211Q6ICI0 200 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 TBC1D26Q86UD7 250 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 ZNF429Q86V71 674 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 OR8G5Q8NG78 346 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 PIGCQ92535 297 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 SPIN2AQ99865 258 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 SPIN2BQ9BPZ2 258 aa11.17□□□□□ -0.62
DDX11-223ENST00000542838 P4HTMQ9NXG6 502 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms