RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 SLC6A1P30531 599 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 FUT6P51993 359 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 BCDIN3DQ7Z5W3 292 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 SLC35F2Q8IXU6 374 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 ENTHD1Q8IYW4 607 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 CORO2AQ92828 525 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 PRR25Q96S07 402 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 CHST5Q9GZS9 411 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 PLEKHA1Q9HB21 404 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 ADGRL4Q9HBW9 690 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 ZFP57Q9NU63 452 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 LINC00527Q9UJ94 153 aa14.06□□□□□ -0.16
CLSTN3-214ENST00000542663 A0A087X0M5 115 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 TRBV2A0A0J9YWF9 115 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 A0A1B0GX30 115 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 NUDT19A8MXV4 375 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 SIRPB1O00241 398 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 PRKYO43930 277 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 RAMP3O60896 148 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 CEACAM3P40198 252 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 GLIPR1P48060 266 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 LUMP51884 338 aaPredicted RBP14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 SNU13P55769 128 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 CBX1P83916 185 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 SSX6Q7RTT6 188 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 CATSPERDQ86XM0 798 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 Q8IYB0 196 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 ADGRG5Q8IZF4 528 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 FAM58AQ8N1B3 248 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 CHPT1Q8WUD6 406 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 BORCS8Q96FH0 119 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 RAX2Q96IS3 184 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 ZNF556Q9HAH1 456 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 TAS2R3Q9NYW6 316 aa14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 ZMAT5Q9UDW3 170 aaKnown RBP14.05□□□□□ -0.16
CLSTN3-214ENST00000542663 TRGV10A0A0A0MS01 117 aa14.04□□□□□ -0.16
CLSTN3-214ENST00000542663 RPP14O95059 124 aaKnown RBP14.04□□□□□ -0.16
CLSTN3-214ENST00000542663 ZFPL1O95159 310 aa14.04□□□□□ -0.16
CLSTN3-214ENST00000542663 PRKACAP17612 351 aa14.04□□□□□ -0.16
CLSTN3-214ENST00000542663 AESQ08117 197 aa14.04□□□□□ -0.16
CLSTN3-214ENST00000542663 SPIN3Q5JUX0 258 aa14.04□□□□□ -0.16
CLSTN3-214ENST00000542663 C5orf56Q8N8D9 126 aa14.04□□□□□ -0.16
CLSTN3-214ENST00000542663 CREB3L1Q96BA8 519 aa14.04□□□□□ -0.16
CLSTN3-214ENST00000542663 ASCL2Q99929 193 aa14.04□□□□□ -0.16
CLSTN3-214ENST00000542663 OOSP1A8MZH6 123 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 B2RBV5 119 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 M0R129 80 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 GNGT2O14610 69 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 TOR1AO14656 332 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 SYT7O43581 403 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 GATBO75879 557 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 OR2H2O95918 312 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 ANXA8P13928 327 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 MNDAP41218 407 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 CDC42P60953 191 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 ACTR3P61158 418 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 RBM39Q14498 530 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 HSP90B2PQ58FF3 399 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 CASC10Q5T4H9 136 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 CCDC144NLQ6NUI1 221 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 MEPCEQ7L2J0 689 aaKnown RBP14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 THNSL2Q86YJ6 484 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 ZNF695Q8IW36 515 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 ARHGAP24Q8N264 748 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 MNTQ99583 582 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 TEX12Q9BXU0 123 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 CLN6Q9NWW5 311 aa14.03□□□□□ -0.16
CLSTN3-214ENST00000542663 BIRC6Q9NR09 4857 aa14.02□□□□□ -0.16
CLSTN3-214ENST00000542663 IGKV1-9A0A0C4DH69 117 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 ZNF670-ZNF695F2Z2N8 137 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 FAM106CPP0CH98 169 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 RBP2P50120 134 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 CRISP1P54107 249 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 PRRX1P54821 245 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 KPNB1Q14974 876 aaKnown RBP14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 C17orf58Q2M2W7 97 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 OR56B4Q8NH76 319 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 CANT1Q8WVQ1 401 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 ASB9Q96DX5 294 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 COQ2Q96H96 371 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 HMG20AQ9NP66 347 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 MED4Q9NPJ6 270 aa14.02□□□□□ -0.17
CLSTN3-214ENST00000542663 DNAH1Q9P2D7 4330 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 A0A1W2PPI3 338 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 ODAMA1E959 279 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 LINC01548A6NM66 108 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 SERPINE3A8MV23 424 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 CCL24O00175 119 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 IGHG2P01859 326 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 PTGFRP43088 359 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 POU3F4P49335 361 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 EFNB1P98172 346 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 DIAPH2-AS1Q14236 149 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 PTGES3Q15185 160 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 DEFB136Q30KP8 78 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 COMMD1Q8N668 190 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 YIPF7Q8N8F6 280 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 DNAAF1Q8NEP3 725 aa14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 EXOSC4Q9NPD3 245 aaKnown RBP14.01□□□□□ -0.17
CLSTN3-214ENST00000542663 GLS2Q9UI32 602 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms