RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 AQP12AQ8IXF9 295 aa10.38□□□□□ -0.75
SCARB1-207ENST00000541661 DNAAF1Q8NEP3 725 aa10.38□□□□□ -0.75
SCARB1-207ENST00000541661 BCAS4Q8TDM0 211 aa10.38□□□□□ -0.75
SCARB1-207ENST00000541661 C10orf35Q96D05 121 aa10.38□□□□□ -0.75
SCARB1-207ENST00000541661 GLS2Q9UI32 602 aa10.38□□□□□ -0.75
SCARB1-207ENST00000541661 A0A087X0M5 115 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 TRGV10A0A0A0MS01 117 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 A0A1B0GX30 115 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FUOMA2VDF0 154 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FAM90A18PA6NE21 464 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FAM90A16PA6NEW6 464 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FAM90A20PA6NIJ5 464 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FAM90A9PA6NNJ1 464 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FAM90A12PA8MX19 464 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FAM90A5PA8MXJ8 464 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 ENTPD6O75354 484 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 SERPINA3P01011 423 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FAM90A15PP0C7V4 464 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FAM90A13PP0C7W8 464 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FAM90A14PP0C7W9 464 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 FAM90A24PP0C7X0 464 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 LMO1P25800 156 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 DUSP1P28562 367 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 RBP2P50120 134 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 RPL23AP62750 156 aaKnown RBP10.37□□□□□ -0.75
SCARB1-207ENST00000541661 HLA-DRB5Q30154 266 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 C9orf152Q5JTZ5 239 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 NXNL2Q5VZ03 156 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 RNF144BQ7Z419 303 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 BCDIN3DQ7Z5W3 292 aaKnown RBP10.37□□□□□ -0.75
SCARB1-207ENST00000541661 THNSL2Q86YJ6 484 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 P2RX4Q99571 388 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 ZNF649Q9BS31 505 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 ZNF286AQ9HBT8 521 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 ZFP57Q9NU63 452 aa10.37□□□□□ -0.75
SCARB1-207ENST00000541661 RBFOX1Q9NWB1 397 aaKnown RBP10.37□□□□□ -0.75
SCARB1-207ENST00000541661 H2AFY2Q9P0M6 372 aaPredicted RBP10.37□□□□□ -0.75
SCARB1-207ENST00000541661 RPP14O95059 124 aaKnown RBP10.36□□□□□ -0.75
SCARB1-207ENST00000541661 CYB5AP00167 134 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 KRT8P05787 483 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 FAM106CPP0CH98 169 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 PRKACAP17612 351 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 BCL3P20749 454 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 CALB2P22676 271 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 GDNFP39905 211 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 MYCNOSP40205 109 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 MNDAP41218 407 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 ATP1B3P54709 279 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 PRRX1P54821 245 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 ODF4Q2M2E3 257 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 CCDC144NLQ6NUI1 221 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 FAHD1Q6P587 224 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 UNQ9370/PRO34162Q6UXP9 181 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 SSX6Q7RTT6 188 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 OR2W3Q7Z3T1 314 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 YIPF7Q8N8F6 280 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 CHPT1Q8WUD6 406 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 PP6455Q8WZ26 134 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 CCDC124Q96CT7 223 aaKnown RBP10.36□□□□□ -0.75
SCARB1-207ENST00000541661 NRBF2Q96F24 287 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 PRRG3Q9BZD7 231 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 HMG20AQ9NP66 347 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 MOB4Q9Y3A3 225 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 HSPE1-MOB4S4R3N1 261 aa10.36□□□□□ -0.75
SCARB1-207ENST00000541661 METTL15A6NJ78 407 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 H0YHG0 523 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 TOR1AO14656 332 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 SH2D1BO14796 132 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 RAMP3O60896 148 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 CCDC159P0C7I6 412 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 T-ENOLP0DO92 83 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 GLIPR1P48060 266 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 DAPP51397 102 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 DGCR2P98153 550 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 AESQ08117 197 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 KPNB1Q14974 876 aaKnown RBP10.35□□□□□ -0.75
SCARB1-207ENST00000541661 ZNF329Q86UD4 541 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 TCEANCQ8N8B7 351 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 TMEM163Q8TC26 289 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 ADI1Q9BV57 179 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 EXOSC4Q9NPD3 245 aaKnown RBP10.35□□□□□ -0.75
SCARB1-207ENST00000541661 PCDHB16Q9NRJ7 776 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 U3KQK5 164 aa10.35□□□□□ -0.75
SCARB1-207ENST00000541661 DNAH7Q8WXX0 4024 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 IGKV1-9A0A0C4DH69 117 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 FAM172BPA6NC97 362 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 H3BSH0 61 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 M0R129 80 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 SIRPB1O00241 398 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 SULT1C4O75897 302 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 OR2H2O95918 312 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 CSN2P05814 226 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 OR2T7P0C7T2 308 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 CALCBP10092 127 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 OR3A4PP47883 348 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 GP2P55259 537 aaKnown RBP10.34□□□□□ -0.75
SCARB1-207ENST00000541661 MTCP1P56278 107 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 PDZK1IP1Q13113 114 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 C12orf73Q69YU5 71 aa10.34□□□□□ -0.75
SCARB1-207ENST00000541661 C18orf65Q6ZTR6 163 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms