RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 A0A0U1RQV5 110 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 ZNF587BE7ETH6 402 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 TGFBR3LH3BV60 316 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 ICOSLGO75144 302 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 CRTAPO75718 401 aaPredicted RBP9.07□□□□□ -0.96
CHFR-219ENST00000541341 IGHEP01854 428 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 IGHG1P01857 330 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 PGA3P0DJD8 388 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 ZNF708P17019 499 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 S100GP29377 79 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 CSNK1A1P48729 337 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 NKX6-1P78426 367 aaPredicted RBP9.07□□□□□ -0.96
CHFR-219ENST00000541341 H3F3AP84243 136 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 HSF1Q00613 529 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 ZNF616Q08AN1 781 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 RBM39Q14498 530 aaKnown RBP9.07□□□□□ -0.96
CHFR-219ENST00000541341 SSPNQ14714 243 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 OR8G1Q15617 311 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 ACSF3Q4G176 576 aaPredicted RBP9.07□□□□□ -0.96
CHFR-219ENST00000541341 ADAM5Q6NVV9 412 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 HEPN1Q6WQI6 88 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 LINC00696Q6ZRV3 163 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 SLC16A13Q7RTY0 426 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 PRSS58Q8IYP2 241 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 ZADH2Q8N4Q0 377 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 GVQW1Q8N7I0 195 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 ZNF610Q8N9Z0 462 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 OR51A2Q8NGJ7 313 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 OR14L1PQ8NHC6 308 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 CD300LFQ8TDQ1 290 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 GPR119Q8TDV5 335 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 SECTM1Q8WVN6 248 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 RAB24Q969Q5 203 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 ADIPOR1Q96A54 375 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 TVP23CQ96ET8 276 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 FER1L6-AS2Q96M78 137 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 TECTBQ96PL2 329 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 ADOQ96SZ5 270 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 NIPSNAP3BQ9BS92 247 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 GGACTQ9BVM4 153 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 VN1R1Q9GZP7 353 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 CTDSP1Q9GZU7 261 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 TMEM231Q9H6L2 316 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 ZMAT3Q9HA38 289 aaKnown RBP9.07□□□□□ -0.96
CHFR-219ENST00000541341 POLR1DQ9Y2S0 133 aa9.07□□□□□ -0.96
CHFR-219ENST00000541341 CSMD2Q7Z408 3487 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 LOC102723996A0A087X1L8 192 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 LOC102725191A0A1B0GVB3 256 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 RBFOX3A6NFN3 312 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 WIPF3A6NGB9 483 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 H7C1Q1 480 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 TXNL1O43396 289 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 OIP5O43482 229 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 ZG16O60844 167 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 DFFBO76075 338 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 PTBP3O95758 552 aaKnown RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 IGKV3-11P04433 115 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 OR8U9P0C7N5 309 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 RBP2P50120 134 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 LSM6P62312 80 aaKnown RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 SUPT4H1P63272 117 aaKnown RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 SRSF3P84103 164 aaKnown RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 ANKRD55Q3KP44 614 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 TMEM176BQ3YBM2 270 aaPredicted RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 KHDC3LQ587J8 217 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 CBLN3Q6UW01 205 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 PLXDC2Q6UX71 529 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 OR13C9Q8NGT0 318 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 OR5R1Q8NH85 324 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 PTPMT1Q8WUK0 201 aaPredicted RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 SPSB1Q96BD6 273 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 MARS2Q96GW9 593 aaKnown RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 OR10C1Q96KK4 312 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 MRGPRX4Q96LA9 322 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 NOL4LQ96MY1 436 aaPredicted RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 ADAT1Q9BUB4 502 aaKnown RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 CHST5Q9GZS9 411 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 NXF5Q9H1B4 397 aaKnown RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 KLHL13Q9P2N7 655 aa9.06□□□□□ -0.96
CHFR-219ENST00000541341 TEP1Q99973 2627 aaKnown RBP9.06□□□□□ -0.96
CHFR-219ENST00000541341 NOTCH2Q04721 2471 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 MPDZO75970 2070 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 LRP5LA4QPB2 252 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 MSGN1A6NI15 193 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 FTCDNL1E5RQL4 147 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 CLN5O75503 358 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 ADAP1O75689 374 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 IFNA1P01562 189 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 HEXBP07686 556 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 OR8U8P0C7N1 319 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 ZNF728P0DKX0 622 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 RPS2P15880 293 aaKnown RBP9.05□□□□□ -0.96
CHFR-219ENST00000541341 NQO2P16083 231 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 HIST1H1BP16401 226 aaKnown RBP9.05□□□□□ -0.96
CHFR-219ENST00000541341 RPS10P46783 165 aaKnown RBP9.05□□□□□ -0.96
CHFR-219ENST00000541341 CLRN1P58418 232 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 DLK1P80370 383 aa9.05□□□□□ -0.96
CHFR-219ENST00000541341 SRSF7Q16629 238 aaKnown RBP eCLIP9.05□□□□□ -0.96
CHFR-219ENST00000541341 OR2B11Q5JQS5 317 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms