RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CMTM4Q8IZR5 234 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 KIR3DL3Q8N743 410 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 ASCC1Q8N9N2 400 aaKnown RBP15.56■□□□□ 0.08
VPS33A-205ENST00000541169 PPIL3Q9H2H8 161 aaKnown RBP15.56■□□□□ 0.08
VPS33A-205ENST00000541169 SPACA1Q9HBV2 294 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 AUP1Q9Y679 476 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 V9GY05 133 aa15.56■□□□□ 0.08
VPS33A-205ENST00000541169 TLN2Q9Y4G6 2542 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 DEGS1O15121 323 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 SLC22A1O15245 554 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 ZNF737O75373 536 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 CRLF1O75462 422 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 CDRT1O95170 752 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 BPNT1O95861 308 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 CSN2P05814 226 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 ADRA2CP18825 462 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 CFPP27918 469 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 HTR2CP28335 458 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 KCNJ3P48549 501 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 FAM189A2Q15884 450 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 Q71RC1 249 aaPredicted RBP15.55■□□□□ 0.08
VPS33A-205ENST00000541169 GDPD3Q7L5L3 318 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 RNF144BQ7Z419 303 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 LY6G5BQ8NDX9 201 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 KCTD7Q96MP8 289 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 MRPS26Q9BYN8 205 aaKnown RBP15.55■□□□□ 0.08
VPS33A-205ENST00000541169 MMP26Q9NRE1 261 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 TXNL4BQ9NX01 149 aaKnown RBP15.55■□□□□ 0.08
VPS33A-205ENST00000541169 KPTNQ9Y664 436 aa15.55■□□□□ 0.08
VPS33A-205ENST00000541169 hCG_1809904A0A1W2PP81 198 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 A0A1W2PPE2 198 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 A0A1W2PR64 198 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 A0A1W2PRV1 198 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 C22orf46C9J442 243 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 INAFM1C9JVW0 142 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 SLC17A2O00624 439 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 MGST3O14880 152 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 TMEM127O75204 238 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 OR2H2O95918 312 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 ZNF44P15621 663 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 ERP29P30040 261 aaKnown RBP15.54■□□□□ 0.08
VPS33A-205ENST00000541169 RBM11P57052 281 aaKnown RBP15.54■□□□□ 0.08
VPS33A-205ENST00000541169 MEF2CQ06413 473 aaPredicted RBP15.54■□□□□ 0.08
VPS33A-205ENST00000541169 BLMHQ13867 455 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 SLC22A6Q4U2R8 563 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 C22orf42Q6IC83 251 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 BATF2Q8N1L9 274 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 OR4D6Q8NGJ1 314 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 KCNG3Q8TAE7 436 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 NANPQ8TBE9 248 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 H1FXQ92522 213 aaKnown RBP15.54■□□□□ 0.08
VPS33A-205ENST00000541169 TMPRSS13Q9BYE2 586 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 PLGRKTQ9HBL7 147 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 ST3GAL6Q9Y274 331 aa15.54■□□□□ 0.08
VPS33A-205ENST00000541169 RAB3BP20337 219 aa15.53■□□□□ 0.08
VPS33A-205ENST00000541169 SERPINA2P20848 420 aa15.53■□□□□ 0.08
VPS33A-205ENST00000541169 GABRR1P24046 479 aa15.53■□□□□ 0.08
VPS33A-205ENST00000541169 BPIFB3P59826 476 aa15.53■□□□□ 0.08
VPS33A-205ENST00000541169 RPL31P62899 125 aaKnown RBP15.53■□□□□ 0.08
VPS33A-205ENST00000541169 METTL11BQ5VVY1 283 aa15.53■□□□□ 0.08
VPS33A-205ENST00000541169 A0A0G2JK05 382 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 A0A1B0GW55 424 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 A0A1W2PQ09 198 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 M0R1W7 72 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 GLAP06280 429 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 DUX4L2P0CJ85 424 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 DUX4L3P0CJ86 424 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 DUX4L4P0CJ87 422 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 DUX4L5P0CJ88 424 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 DUX4L6P0CJ89 424 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 DUX4L7P0CJ90 424 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 PAX5Q02548 391 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 GRK1Q15835 563 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 RAB11BQ15907 218 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 Q6P435 159 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 DUX4L9Q6RFH8 374 aaPredicted RBP15.52■□□□□ 0.08
VPS33A-205ENST00000541169 C17orf107Q6ZR85 190 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 OR2W3Q7Z3T1 314 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 NCOR1P1Q9H4R4 102 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 DUX4Q9UBX2 424 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 FBLN5Q9UBX5 448 aa15.52■□□□□ 0.08
VPS33A-205ENST00000541169 NSD1Q96L73 2696 aaPredicted RBP15.52■□□□□ 0.07
VPS33A-205ENST00000541169 hADV38S2A0JD32 116 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 FCN3O75636 299 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 FAM157CP0CG43 387 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 SELLP14151 372 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 ARSBP15848 533 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 MGMTP16455 207 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 SRD5A1P18405 259 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 DUSP1P28562 367 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 SRP14P37108 136 aaKnown RBP15.51■□□□□ 0.07
VPS33A-205ENST00000541169 CEBPDP49716 269 aaPredicted RBP15.51■□□□□ 0.07
VPS33A-205ENST00000541169 SCN1BQ07699 218 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 RBM39Q14498 530 aaKnown RBP15.51■□□□□ 0.07
VPS33A-205ENST00000541169 PDCD1Q15116 288 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 OR10K1Q8NGX5 313 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 UPRTQ96BW1 309 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 C1orf147Q96MC9 270 aaPredicted RBP15.51■□□□□ 0.07
VPS33A-205ENST00000541169 CHCHD6Q9BRQ6 235 aa15.51■□□□□ 0.07
VPS33A-205ENST00000541169 BARHL1Q9BZE3 327 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms