RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 A0A1W2PRM7 423 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 MEIOCA2RUB1 952 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 FAM90A8PA6NJQ4 464 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 GABRPO00591 440 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 MGST3O14880 152 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 NDUFA7O95182 113 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 OR2H2O95918 312 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 CD1AP06126 327 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 CD2P06729 351 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 HCKP08631 526 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 OCM2P0CE71 109 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 OCMP0CE72 109 aaPredicted RBP11.55□□□□□ -0.56
USP28-209ENST00000540925 ZNF728P0DKX0 622 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 RAB3AP20336 220 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 AQP4P55087 323 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 MED21Q13503 144 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 YIF1BQ5BJH7 314 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 AHSA2Q719I0 299 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 GDPD3Q7L5L3 318 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 NANOGP1Q8N7R0 232 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 BEND2Q8NDZ0 799 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 OR13C5Q8NGS8 318 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 DYRK2Q92630 601 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 ZNF747Q9BV97 191 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 CHST6Q9GZX3 395 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 MEGF9Q9H1U4 602 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 HEXA-AS1Q9H8Q6 139 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 C1RLQ9NZP8 487 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 LINC00312Q9Y6C7 94 aa11.55□□□□□ -0.56
USP28-209ENST00000540925 TRBV5-7A0A0A0MS05 114 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 A0A0G2JK05 382 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 ODF3BA8MYP8 253 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 SH2D1BO14796 132 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 WIPF1O43516 503 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 GPR137BO60478 399 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 CSN2P05814 226 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 FSTP19883 344 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 GABRR1P24046 479 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 MTNR1BP49286 362 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 EDDM3BP56851 147 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 GRK1Q15835 563 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 C6orf141Q5SZD1 244 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 C3orf56Q8N813 242 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 ZFP41Q8N8Y5 198 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 BPIFB6Q8NFQ5 453 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 OR51T1Q8NGJ9 327 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 ORAI1Q96D31 301 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 ZNF714Q96N38 554 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 DPAGT1Q9H3H5 408 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 EXOSC4Q9NPD3 245 aaKnown RBP11.54□□□□□ -0.56
USP28-209ENST00000540925 PAK1IP1Q9NWT1 392 aaPredicted RBP11.54□□□□□ -0.56
USP28-209ENST00000540925 CHCHD3Q9NX63 227 aaKnown RBP11.54□□□□□ -0.56
USP28-209ENST00000540925 GSTK1Q9Y2Q3 226 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 FAM96BQ9Y3D0 163 aa11.54□□□□□ -0.56
USP28-209ENST00000540925 hCG_1809904A0A1W2PP81 198 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 A0A1W2PPE2 198 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 A0A1W2PR64 198 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 A0A1W2PRV1 198 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 hADV38S2A0JD32 116 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 MEGF11A6BM72 1044 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 SIRPB1O00241 398 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 SLC33A1O00400 549 aaPredicted RBP11.53□□□□□ -0.56
USP28-209ENST00000540925 CDK1P06493 297 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 IGHV1-8P0DP01 117 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 TMEM225BP0DP42 221 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 MDKP21741 143 aaPredicted RBP11.53□□□□□ -0.56
USP28-209ENST00000540925 BMXP51813 675 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 SNU13P55769 128 aaKnown RBP11.53□□□□□ -0.56
USP28-209ENST00000540925 P2RX3P56373 397 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 WNT4P56705 351 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 TAS2R43P59537 309 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 EDDM3AQ14507 147 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 AANATQ16613 207 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 Q499Y3 187 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 LDLRAD2Q5SZI1 272 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 ZNF782Q6ZMW2 699 aaPredicted RBP11.53□□□□□ -0.56
USP28-209ENST00000540925 LYPD6Q86Y78 171 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 STX19Q8N4C7 294 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 TPRX1Q8N7U7 411 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 CHST4Q8NCG5 386 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 OR11H6Q8NGC7 330 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 CORO2AQ92828 525 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 CPNE2Q96FN4 548 aaPredicted RBP11.53□□□□□ -0.56
USP28-209ENST00000540925 COQ2Q96H96 371 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 CDCA4Q9BXL8 241 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 TMEM138Q9NPI0 162 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 TNFRSF19Q9NS68 423 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 IL36GQ9NZH8 169 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 GLS2Q9UI32 602 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 VPREB3Q9UKI3 123 aa11.53□□□□□ -0.56
USP28-209ENST00000540925 LSM2Q9Y333 95 aaKnown RBP11.53□□□□□ -0.56
USP28-209ENST00000540925 TRAV8-7A0A075B6U6 113 aa11.52□□□□□ -0.57
USP28-209ENST00000540925 MEX3AA1L020 520 aaKnown RBP11.52□□□□□ -0.57
USP28-209ENST00000540925 MAGEA13PA6NCF6 341 aa11.52□□□□□ -0.57
USP28-209ENST00000540925 POM121CA8CG34 1229 aa11.52□□□□□ -0.57
USP28-209ENST00000540925 HAX1O00165 279 aa11.52□□□□□ -0.57
USP28-209ENST00000540925 MYF6P23409 242 aa11.52□□□□□ -0.57
USP28-209ENST00000540925 PTGFRP43088 359 aa11.52□□□□□ -0.57
USP28-209ENST00000540925 RAG2P55895 527 aa11.52□□□□□ -0.57
USP28-209ENST00000540925 SLC35A2P78381 396 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms