RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 C9orf139Q6ZV77 190 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 PRSS48Q7RTY5 328 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 PHC2Q8IXK0 858 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 OR5D13Q8NGL4 314 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 OR10K1Q8NGX5 313 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 TBC1D15Q8TC07 691 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 SNX22Q96L94 193 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 ZNF48Q96MX3 618 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-215ENST00000540904 DUX5Q96PT3 197 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 DERL3Q96Q80 235 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 NR1H4Q96RI1 486 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-215ENST00000540904 C19orf24Q9BVV8 132 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 METTL8Q9H825 291 aaKnown RBP7.58□□□□□ -1.2
SNHG1-215ENST00000540904 RHOFQ9HBH0 211 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 EXOSC4Q9NPD3 245 aaKnown RBP7.58□□□□□ -1.2
SNHG1-215ENST00000540904 NOX4Q9NPH5 578 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 BLOC1S6Q9UL45 172 aa7.58□□□□□ -1.2
SNHG1-215ENST00000540904 FBN1P35555 2871 aaKnown RBP7.58□□□□□ -1.2
SNHG1-215ENST00000540904 A0A1W2PPH5 198 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 A0A1W2PRD5 423 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 A0A1W2PRF3 423 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 A0A1W2PRM7 423 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 TRIM77I1YAP6 450 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 DEGS1O15121 323 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 PIN1P1O15428 100 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 CDRT1O95170 752 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 MAS1P04201 325 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 ZNF44P15621 663 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 CCL3L1P16619 93 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 FSTP19883 344 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 MAPK3P27361 379 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-215ENST00000540904 MTNR1BP49286 362 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 BMXP51813 675 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 BAMBIQ13145 260 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 KLRD1Q13241 179 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 ZNF273Q14593 569 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 TUSC1Q2TAM9 212 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 DEFB112Q30KQ8 113 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 ACSM3Q53FZ2 586 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 LIPKQ5VXJ0 399 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 C1orf122Q6ZSJ8 110 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 JAGN1Q8N5M9 183 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 MS4A15Q8N5U1 240 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 TPRX1Q8N7U7 411 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 ZDHHC22Q8N966 263 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 PXT1Q8NFP0 134 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 OR4S1Q8NGB4 309 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 THRSPQ92748 146 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 UFD1Q92890 307 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 TMEM203Q969S6 136 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 S100A13Q99584 98 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 SEBOXQ9HB31 216 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-215ENST00000540904 ING4Q9UNL4 249 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 FOXJ3Q9UPW0 622 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 MXRA5Q9NR99 2828 aa7.57□□□□□ -1.2
SNHG1-215ENST00000540904 A0A0G2JK05 382 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 hCG_1809904A0A1W2PP81 198 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 A0A1W2PPE2 198 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 A0A1W2PR64 198 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 A0A1W2PRV1 198 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 DNAJC9-AS1A6NH13 148 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 RNASEK-C17orf49H0YIS7 233 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 HSPB6O14558 160 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 MGST3O14880 152 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 GPX5O75715 221 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 HTR3BO95264 441 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 CSTBP04080 98 aaKnown RBP7.56□□□□□ -1.2
SNHG1-215ENST00000540904 PRTN3P24158 256 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 OR3A1P47881 315 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 ERVFRD-1P60508 538 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 UBA52P62987 128 aaKnown RBP7.56□□□□□ -1.2
SNHG1-215ENST00000540904 GUCA2AQ02747 115 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 GPR50Q13585 617 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 PIGYQ3MUY2 71 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 SLC22A6Q4U2R8 563 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 FAM27D1Q5T7N8 215 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 NCR3LG1Q68D85 454 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 ELP2Q6IA86 826 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 METAP1DQ6UB28 335 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-215ENST00000540904 ASCL4Q6XD76 172 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 CEACAM19Q7Z692 300 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 PNKDQ8N490 385 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-215ENST00000540904 PPP1R35Q8TAP8 253 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 ZFAND2BQ8WV99 257 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 TNFRSF14Q92956 283 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 MUL1Q969V5 352 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 MGLLQ99685 303 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 METTL9Q9H1A3 318 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 PPA2Q9H2U2 334 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 UNKLQ9H9P5 680 aaKnown RBP7.56□□□□□ -1.2
SNHG1-215ENST00000540904 TCF7L1Q9HCS4 588 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 ING3Q9NXR8 418 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 ATRQ13535 2644 aa7.56□□□□□ -1.2
SNHG1-215ENST00000540904 DOCK11Q5JSL3 2073 aa7.55□□□□□ -1.2
SNHG1-215ENST00000540904 A0A0U1RQK1 487 aa7.55□□□□□ -1.2
SNHG1-215ENST00000540904 hADV38S2A0JD32 116 aa7.55□□□□□ -1.2
SNHG1-215ENST00000540904 SLC33A1O00400 549 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-215ENST00000540904 NPFFO15130 113 aa7.55□□□□□ -1.2
SNHG1-215ENST00000540904 HOXA3O43365 443 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms