RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PPP3R1P63098 170 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 Q6P435 159 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 ASCL4Q6XD76 172 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 Q6YL49 198 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 SATL1Q86VE3 508 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 PNKDQ8N490 385 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 TNFAIP8L1Q8WVP5 186 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 CNBD2Q96M20 576 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 EXOSC4Q9NPD3 245 aaKnown RBP13.82□□□□□ -0.2
CD9-209ENST00000540891 RAB26Q9ULW5 256 aa13.82□□□□□ -0.2
CD9-209ENST00000540891 MEX3AA1L020 520 aaKnown RBP13.81□□□□□ -0.2
CD9-209ENST00000540891 CLDN34H7C241 214 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 SIRPB1O00241 398 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 MAGEB3O15480 346 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 HOXA3O43365 443 aaPredicted RBP13.81□□□□□ -0.2
CD9-209ENST00000540891 GABRR1P24046 479 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 VHLP40337 213 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 MTNR1BP49286 362 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 EDDM3BP56851 147 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 BLMHQ13867 455 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 INSL4Q14641 139 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 SPHARQ15513 63 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 GRK1Q15835 563 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 DDI2Q5TDH0 399 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 ELP2Q6IA86 826 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 GDPD3Q7L5L3 318 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 TPRX1Q8N7U7 411 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 Q8NFD4 153 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 OR5D13Q8NGL4 314 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 CPNE2Q96FN4 548 aaPredicted RBP13.81□□□□□ -0.2
CD9-209ENST00000540891 DERL3Q96Q80 235 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 GPER1Q99527 375 aa13.81□□□□□ -0.2
CD9-209ENST00000540891 A0A1W2PRD5 423 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 A0A1W2PRF3 423 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 A0A1W2PRM7 423 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 C17orf98A8MV24 154 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 RGS10O43665 173 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 RNASE1P07998 156 aaKnown RBP13.8□□□□□ -0.2
CD9-209ENST00000540891 MELTFP08582 738 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 ZNF93P35789 620 aaPredicted RBP13.8□□□□□ -0.2
CD9-209ENST00000540891 PTGFRP43088 359 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 UBE2E1P51965 193 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 GUCA2AQ02747 115 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 EDDM3AQ14507 147 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 NCR3LG1Q68D85 454 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 OR10K1Q8NGX5 313 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 TBC1D15Q8TC07 691 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 ZDHHC16Q969W1 377 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 ZNF184Q99676 751 aaPredicted RBP13.8□□□□□ -0.2
CD9-209ENST00000540891 FAM192AQ9GZU8 254 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 NOX4Q9NPH5 578 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 GLS2Q9UI32 602 aa13.8□□□□□ -0.2
CD9-209ENST00000540891 A0A0G2JK05 382 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 TMEM89A2RUT3 159 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 SLC33A1O00400 549 aaPredicted RBP13.79□□□□□ -0.2
CD9-209ENST00000540891 SH2D1BO14796 132 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 MGST3O14880 152 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 NPFFO15130 113 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 CDRT1O95170 752 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 TGFBR2P37173 567 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 MED22Q15528 200 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 UNQ9370/PRO34162Q6UXP9 181 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 LYPD6Q86Y78 171 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 OR51T1Q8NGJ9 327 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 ZMAT3Q9HA38 289 aaKnown RBP13.79□□□□□ -0.2
CD9-209ENST00000540891 FOXJ3Q9UPW0 622 aa13.79□□□□□ -0.2
CD9-209ENST00000540891 A0A1W2PPH5 198 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 ZNF728P0DKX0 622 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 ZNF44P15621 663 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 EEF1B2P24534 225 aaKnown RBP13.78□□□□□ -0.2
CD9-209ENST00000540891 ERP29P30040 261 aaKnown RBP13.78□□□□□ -0.2
CD9-209ENST00000540891 SAA4P35542 130 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 BMXP51813 675 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 GP2P55259 537 aaKnown RBP13.78□□□□□ -0.2
CD9-209ENST00000540891 P2RX3P56373 397 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 ACTG1P63261 375 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 MEF2CQ06413 473 aaPredicted RBP13.78□□□□□ -0.2
CD9-209ENST00000540891 SCN1BQ07699 218 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 PRSS48Q7RTY5 328 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 LDLRAD3Q86YD5 345 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 AJUBAQ96IF1 538 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 PPA2Q9H2U2 334 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 IL36GQ9NZH8 169 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 CKLFQ9UBR5 152 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 DSCAML1Q8TD84 2053 aa13.78□□□□□ -0.2
CD9-209ENST00000540891 DEGS1O15121 323 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 SC5DO75845 299 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 CSN2P05814 226 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 MAP2K4P45985 399 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 IL13RA2Q14627 380 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 RSU1Q15404 277 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 PIGYQ3MUY2 71 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 ACSM3Q53FZ2 586 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 RBM48Q5RL73 367 aaKnown RBP13.77□□□□□ -0.21
CD9-209ENST00000540891 FAM27D1Q5T7N8 215 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 ZNF782Q6ZMW2 699 aaPredicted RBP13.77□□□□□ -0.21
CD9-209ENST00000540891 MS4A15Q8N5U1 240 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 CHST4Q8NCG5 386 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 PPP1R35Q8TAP8 253 aa13.77□□□□□ -0.21
CD9-209ENST00000540891 C17orf50Q8WW18 174 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms