RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 IMMP1LQ96LU5 166 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 C12orf49Q9H741 205 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 NECAP2Q9NVZ3 263 aa12.22□□□□□ -0.45
INO80E-203ENST00000540562 DMXL2Q8TDJ6 3036 aa12.21□□□□□ -0.45
INO80E-203ENST00000540562 POLEQ07864 2286 aa12.21□□□□□ -0.45
INO80E-203ENST00000540562 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.45
INO80E-203ENST00000540562 A0A1W2PPH5 198 aa12.21□□□□□ -0.45
INO80E-203ENST00000540562 CRYM-AS1A6NIL9 109 aa12.21□□□□□ -0.45
INO80E-203ENST00000540562 ZNF44P15621 663 aa12.21□□□□□ -0.45
INO80E-203ENST00000540562 CARFQ8N187 725 aa12.21□□□□□ -0.45
INO80E-203ENST00000540562 TMEM100Q9NV29 134 aa12.21□□□□□ -0.45
INO80E-203ENST00000540562 UBE2J1Q9Y385 318 aaPredicted RBP12.21□□□□□ -0.45
INO80E-203ENST00000540562 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.45
INO80E-203ENST00000540562 COL5A1P20908 1838 aaPredicted RBP12.21□□□□□ -0.46
INO80E-203ENST00000540562 A0A1W2PPE2 198 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 A0A1W2PPE3 182 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 SYNGR3O43761 229 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 EIF1BO60739 113 aaKnown RBP12.21□□□□□ -0.46
INO80E-203ENST00000540562 ZNF16P17020 682 aaPredicted RBP12.21□□□□□ -0.46
INO80E-203ENST00000540562 BCL3P20749 454 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 STARD6P59095 220 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 HAGHQ16775 308 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 CXorf66Q5JRM2 361 aaPredicted RBP12.21□□□□□ -0.46
INO80E-203ENST00000540562 GLYATL2Q8WU03 294 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 TMEM54Q969K7 222 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 NTNG2Q96CW9 530 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 ZFP57Q9NU63 452 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 TMEM38BQ9NVV0 291 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 FBLN5Q9UBX5 448 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 ZDHHC8Q9ULC8 765 aa12.21□□□□□ -0.46
INO80E-203ENST00000540562 A0A0U1RQV5 110 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 FOXI3A8MTJ6 420 aaPredicted RBP12.2□□□□□ -0.46
INO80E-203ENST00000540562 GNRHRP30968 328 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 RAC1P63000 192 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 FAM3AP98173 230 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 AWAT1Q58HT5 328 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 UQCC3Q6UW78 93 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 MED12LQ86YW9 2145 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 FAM24BQ8N5W8 94 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 WNT5BQ9H1J7 359 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 NAA60Q9H7X0 242 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 SLC7A10Q9NS82 523 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 FOXD3Q9UJU5 478 aaPredicted RBP12.2□□□□□ -0.46
INO80E-203ENST00000540562 ADAMTS20P59510 1910 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 LINC01387J3KSC0 135 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 CHATP28329 748 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 RPS16P62249 146 aaKnown RBP12.2□□□□□ -0.46
INO80E-203ENST00000540562 FLI1Q01543 452 aaPredicted RBP12.2□□□□□ -0.46
INO80E-203ENST00000540562 FAM27BQ5VT28 67 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 ANGPTL4Q9BY76 406 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 RGCCQ9H4X1 137 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 SLC7A11Q9UPY5 501 aa12.2□□□□□ -0.46
INO80E-203ENST00000540562 IGLV3-32A0A0A0MS00 114 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 ZNF503-AS2A6NEH8 195 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 ZNF98A6NK75 572 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 ETV2O00321 342 aaPredicted RBP12.19□□□□□ -0.46
INO80E-203ENST00000540562 LILRA1O75019 489 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 CBR3O75828 277 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 CST4P01036 141 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 CCL20P78556 96 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 MALLQ13021 153 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 FANCFQ9NPI8 374 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 CTSDP07339 412 aaPredicted RBP12.19□□□□□ -0.46
INO80E-203ENST00000540562 ZNF806P0C7X5 589 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 AVPI1Q5T686 147 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 TUSC5Q8IXB3 177 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 PRRG4Q9BZD6 226 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 OR2H1Q9GZK4 316 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 TPRP12270 2363 aaKnown RBP12.19□□□□□ -0.46
INO80E-203ENST00000540562 ARGFXA6NJG6 315 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 GLP1RP43220 463 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 RAB35Q15286 201 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 C10orf128Q5T292 105 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 OR2Y1Q8NGV0 311 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 NANPQ8TBE9 248 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 ZNF175Q9Y473 711 aa12.19□□□□□ -0.46
INO80E-203ENST00000540562 USF3Q68DE3 2245 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 IGKV1D-13A0A0B4J2D9 117 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 ZNF727A8MUV8 499 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 IGKV1-13P0DP09 117 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 MRPS34P82930 218 aaKnown RBP12.18□□□□□ -0.46
INO80E-203ENST00000540562 ARF1P84077 181 aaKnown RBP12.18□□□□□ -0.46
INO80E-203ENST00000540562 IL15RAQ13261 267 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 TMEM187Q14656 261 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 CNN3Q15417 329 aaKnown RBP12.18□□□□□ -0.46
INO80E-203ENST00000540562 KCNMB1Q16558 191 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 GUK1Q16774 197 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 GGNQ86UU5 652 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 EXTL1Q92935 676 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 SMIM8Q96KF7 97 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 SEC11CQ9BY50 192 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 ZNF286AQ9HBT8 521 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 NDRG3Q9UGV2 375 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 EDARQ9UNE0 448 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 MMP24Q9Y5R2 645 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 TOX3O15405 576 aaPredicted RBP12.18□□□□□ -0.46
INO80E-203ENST00000540562 ADAM20O43506 726 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 SYNGR1O43759 233 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 S100A6P06703 90 aa12.18□□□□□ -0.46
INO80E-203ENST00000540562 CRYGSP22914 178 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms