RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 C20orf196Q8IYI0 205 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 OR2G3Q8NGZ4 309 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 ZNRF4Q8WWF5 429 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 LINC00615Q96LM1 132 aaPredicted RBP8.27□□□□□ -1.09
CLIP1-214ENST00000540539 FRRS1LQ9P0K9 344 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 CDC42EP3Q9UKI2 254 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 GPR132Q9UNW8 380 aa8.27□□□□□ -1.09
CLIP1-214ENST00000540539 TRAV27A0A087WT01 109 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 WIPF3A6NGB9 483 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 RCBTB2O95199 551 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 HRASP01112 189 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 ESDP10768 282 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 PSMB5P28074 263 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 CEBPDP49716 269 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-214ENST00000540539 CLDN6P56747 220 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 CKS1BP61024 79 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 EFEMP1Q12805 493 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 GGTLC2Q14390 218 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 FIGLAQ6QHK4 219 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 UHRF2Q96PU4 802 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 OR5B12Q96R08 314 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 OR2V2Q96R30 315 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 GTSF1LQ9H1H1 148 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 CALHM2Q9HA72 323 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 MRM2Q9UI43 246 aaKnown RBP8.26□□□□□ -1.09
CLIP1-214ENST00000540539 PRUNE2Q8WUY3 3088 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 MDC1Q14676 2089 aaKnown RBP8.26□□□□□ -1.09
CLIP1-214ENST00000540539 NPIPA5A0A0B4J1W7 369 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 A0A0D9SEW6 157 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 A0A1W2PRU2 124 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 C1QTNF3-AMACRE9PGA6 284 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 TLX3O43711 291 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-214ENST00000540539 BRI3O95415 125 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 POU2F2P09086 479 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 MSR1P21757 451 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 UCP1P25874 307 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 HOXD9P28356 352 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-214ENST00000540539 CCR2P41597 374 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 ARG2P78540 354 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 NTHL1P78549 312 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 ADIRFQ15847 76 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 TXNDC8Q6A555 127 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 FBXL22Q6P050 247 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 LRRC69Q6ZNQ3 347 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 COLCA1Q6ZS62 124 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 C5orf17Q8NAS9 161 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 CACNG8Q8WXS5 425 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 ALG14Q96F25 216 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 OR7D2Q96RA2 312 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 PARLQ9H300 379 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 DMRT3Q9NQL9 472 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 CRLS1Q9UJA2 301 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 FBXL7Q9UJT9 491 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 TP53TG3Q9ULZ0 132 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 KIAA2026Q5HYC2 2103 aa8.26□□□□□ -1.09
CLIP1-214ENST00000540539 DOCK9Q9BZ29 2069 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 IGLV3-10A0A075B6K4 115 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 DIRC3C9JPN6 131 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 NRG2O14511 850 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-214ENST00000540539 DRD1P21728 446 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 ELOA3BQ3SY89 546 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 ZNF684Q5T5D7 378 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 BATF2Q8N1L9 274 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 ELOA3Q8NG57 546 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 OR4F17Q8NGA8 305 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 OR5AU1Q8NGC0 362 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 OR52E2Q8NGJ4 325 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 OR4P4Q8NGL7 312 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 OR1B1Q8NGR6 318 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 OR6N2Q8NGY6 317 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 WBP2Q969T9 261 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 RBMXL1Q96E39 390 aaKnown RBP8.25□□□□□ -1.09
CLIP1-214ENST00000540539 OR4F4Q96R69 305 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 NUDT9Q9BW91 350 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 ULBP3Q9BZM4 244 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 PATZ1Q9HBE1 687 aaKnown RBP8.25□□□□□ -1.09
CLIP1-214ENST00000540539 PRSS16Q9NQE7 514 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 CLDND1Q9NY35 253 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 XIRP2A4UGR9 3374 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 TRBV5-4A0A0C4DH59 114 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 FAM230AA0A1W2PPH8 454 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 GRIFINA4D1Z8 144 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 UPK3AO75631 287 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 LIPFP07098 398 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 ATP6V0CP27449 155 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 GPR6P46095 362 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-214ENST00000540539 SLC6A8P48029 635 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 RPL15P61313 204 aaKnown RBP8.25□□□□□ -1.09
CLIP1-214ENST00000540539 RTP5Q14D33 572 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 Q7L0L9 218 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 ZNF440Q8IYI8 595 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 TMEM217Q8N7C4 229 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 OR2T10Q8NGZ9 312 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 SPSB1Q96BD6 273 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 SCARF2Q96GP6 870 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-214ENST00000540539 GUCD1Q96NT3 240 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 PRSS27Q9BQR3 290 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 TUBD1Q9UJT1 453 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 VDAC3Q9Y277 283 aa8.25□□□□□ -1.09
CLIP1-214ENST00000540539 A0A1B0GVT2 93 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms