RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 OR2F1Q13607 317 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 HIST3H3Q16695 136 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 C4orf26Q17RF5 130 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 IZUMO4Q1ZYL8 232 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 CLEC12BQ2HXU8 276 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 HLA-DRB5Q30154 266 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 NSUN5P1Q3KNT7 163 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 SPSB3Q6PJ21 355 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 SLC36A1Q7Z2H8 476 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 NFE4Q86UQ8 179 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 THOC6Q86W42 341 aaKnown RBP3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 CCDC71Q8IV32 467 aaPredicted RBP3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 C10orf107Q8IVU9 208 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 GPD1LQ8N335 351 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 LRRC25Q8N386 305 aaPredicted RBP3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 FTMTQ8N4E7 242 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 ZADH2Q8N4Q0 377 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 ZNF491Q8N8L2 437 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 TMEM178AQ8NBL3 297 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 OR5AP2Q8NGF4 316 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 OR10W1Q8NGF6 305 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 OR52E4Q8NGH9 312 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 OR52N1Q8NH53 320 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 OR51Q1Q8NH59 317 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 ZFAND1Q8TCF1 268 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 TMEM54Q969K7 222 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 RERGQ96A58 199 aaPredicted RBP3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 DDIT4LQ96D03 193 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 PIK3IP1Q96FE7 263 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 MED8Q96G25 268 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 OR10C1Q96KK4 312 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 C9orf85Q96MD7 179 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 ZIM3Q96PE6 472 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 GABRG3Q99928 467 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 ZNF2Q9BSG1 426 aaPredicted RBP3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 TM2D1Q9BX74 207 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 SLC19A3Q9BZV2 496 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 ACTR6Q9GZN1 396 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 NMUR2Q9GZQ4 415 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 COA1Q9GZY4 146 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 IL25Q9H293 177 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 LIME1Q9H400 295 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 C6orf106Q9H6K1 298 aaPredicted RBP3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 ZNF430Q9H8G1 570 aaPredicted RBP3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 WDR41Q9HAD4 459 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 MYOZ1Q9NP98 299 aaPredicted RBP3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 PARVAQ9NVD7 372 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 GLTPQ9NZD2 209 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 COMMD9Q9P000 198 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 THYN1Q9P016 225 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 NDRG2Q9UN36 371 aaKnown RBP3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 ZNF256Q9Y2P7 627 aaPredicted RBP3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 NDUFAF1Q9Y375 327 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 HERC1Q15751 4861 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 WNK1Q9H4A3 2382 aa3.04□□□□□ -1.92
AC055720.1-201ENST00000539552 ADAMTS9Q9P2N4 1935 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 IGHV1OR21-1A0A087WYE8 117 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 FAM240AA0A1B0GVK7 77 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 CLDN24A6NM45 220 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 E9PLD3 99 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 F6UB75 175 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 PHYHO14832 338 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 KMOO15229 486 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 LINC01565O15544 149 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 FGF17O60258 216 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 DPM1O60762 260 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 TRMUO75648 421 aaKnown RBP3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 SCRG1O75711 98 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 CNIH1O95406 144 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 TTC4O95801 387 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 PTTG1O95997 202 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 HAND1O96004 215 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 H2AFZP0C0S5 128 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 RBMY1CP0DJD4 496 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 HSD17B1P14061 328 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 FOLR1P15328 257 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 SELEP16581 610 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 PRKACGP22612 351 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 CRABP1P29762 137 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 RPL12P30050 165 aaKnown RBP3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 MPIP34949 423 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 PFN2P35080 140 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 CDKN2AP42771 156 aaKnown RBP3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 FGF8P55075 233 aaPredicted RBP3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 TCL1AP56279 114 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 ERVK-16P61578 105 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 SNRPD1P62314 119 aaKnown RBP3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 SLC10A7Q0GE19 358 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 TWF1Q12792 350 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 GINS1Q14691 196 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 NRF1Q16656 503 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 NDUFA5Q16718 116 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 TMEM30BQ3MIR4 351 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 KIAA1644Q3SXP7 199 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 BRMS1LQ5PSV4 323 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 NPSR1Q6W5P4 371 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 HOGA1Q86XE5 327 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 LACC1Q8IV20 430 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 SKA3Q8IX90 412 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms