RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 MPPED1O15442 326 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 OR2C1O95371 312 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 LCATP04180 440 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 NQO2P16083 231 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 AADACP22760 399 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 MALLQ13021 153 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 ZNF266Q14584 549 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 HIKESHIQ53FT3 197 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 ZNF774Q6NX45 483 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 BRICD5Q6PL45 260 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 PPP1R3BQ86XI6 285 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 GPR137CQ8N3F9 429 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 SLC35G3Q8N808 338 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 SUMF2Q8NBJ7 301 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 TP53RKQ96S44 253 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 CDX2Q99626 313 aaPredicted RBP8.37□□□□□ -1.07
CDH13-204ENST00000539548 SF3B5Q9BWJ5 86 aaKnown RBP8.37□□□□□ -1.07
CDH13-204ENST00000539548 TMEM222Q9H0R3 208 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 TMPRSS5Q9H3S3 457 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 UNKLQ9H9P5 680 aaKnown RBP8.37□□□□□ -1.07
CDH13-204ENST00000539548 PROK2Q9HC23 129 aa8.37□□□□□ -1.07
CDH13-204ENST00000539548 LOC102723996A0A087X1L8 192 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 A0A0J9YW62 118 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 A0A1W2PQM1 296 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 NKX2-6A6NCS4 301 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 OR6C6A6NF89 314 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 FAM24AA6NFZ4 105 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 PITX3O75364 302 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 CLN5O75503 358 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 TCN2P20062 427 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 FUT3P21217 361 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 RPS23P62266 143 aaKnown RBP8.36□□□□□ -1.07
CDH13-204ENST00000539548 RAC1P63000 192 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 EXT1Q16394 746 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 RAET1LQ5VY80 246 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 SP5Q6BEB4 398 aaPredicted RBP8.36□□□□□ -1.07
CDH13-204ENST00000539548 SPSB3Q6PJ21 355 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 HEPN1Q6WQI6 88 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 OR2G3Q8NGZ4 309 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 OR14L1PQ8NHC6 308 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 ABHD14BQ96IU4 210 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 TMEM56Q96MV1 263 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 RARRES2Q99969 163 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 PLEKHF2Q9H8W4 249 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 SLC7A11Q9UPY5 501 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 TMEM56-RWDD3S4R434 201 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 CABIN1Q9Y6J0 2220 aa8.36□□□□□ -1.07
CDH13-204ENST00000539548 IGSF23A1L1A6 192 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 PPIHO43447 177 aaKnown RBP8.35□□□□□ -1.07
CDH13-204ENST00000539548 DNPH1O43598 174 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 PPYP01298 95 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 CCL3P10147 92 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 ATP6V0CP27449 155 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 NKX2-1P43699 371 aaPredicted RBP8.35□□□□□ -1.07
CDH13-204ENST00000539548 RBM11P57052 281 aaKnown RBP8.35□□□□□ -1.07
CDH13-204ENST00000539548 OR2B8PP59922 312 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 POLR2GP62487 172 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH13-204ENST00000539548 CCL20P78556 96 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 CCL7P80098 99 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 MEX3BQ6ZN04 569 aaKnown RBP8.35□□□□□ -1.07
CDH13-204ENST00000539548 Q6ZPA2 131 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 MAFAQ8NHW3 353 aaPredicted RBP8.35□□□□□ -1.07
CDH13-204ENST00000539548 CPT1CQ8TCG5 803 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 MUCL1Q96DR8 90 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 SLC25A31Q9H0C2 315 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 WDR54Q9H977 334 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 AKIRIN1Q9H9L7 192 aaPredicted RBP8.35□□□□□ -1.07
CDH13-204ENST00000539548 TMEM38BQ9NVV0 291 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 MIOXQ9UGB7 285 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 TCFL5Q9UL49 500 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 PUS1Q9Y606 427 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH13-204ENST00000539548 SHANK1Q9Y566 2161 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 A0A087WWC5 75 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 MED19A0JLT2 244 aaPredicted RBP8.35□□□□□ -1.07
CDH13-204ENST00000539548 ZNF724A8MTY0 619 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 TNFSF11O14788 317 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 HSPA12AO43301 675 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 TXNL1O43396 289 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 CELA2AP08217 269 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 ZNF32P17041 273 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 ASCL1P50553 236 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 RND3P61587 244 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 GUSBP11Q6P575 273 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 Q6ZS49 121 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 DPPA2Q7Z7J5 298 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 SELENOHQ8IZQ5 122 aaKnown RBP8.35□□□□□ -1.07
CDH13-204ENST00000539548 IMMP1LQ96LU5 166 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 TECTBQ96PL2 329 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 SPIN2AQ99865 258 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 SPIN2BQ9BPZ2 258 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 PAPOLGQ9BWT3 736 aaKnown RBP8.35□□□□□ -1.07
CDH13-204ENST00000539548 SRXN1Q9BYN0 137 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 SH2D2AQ9NP31 389 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 KIAA1456Q9P272 454 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 DKKL1Q9UK85 242 aa8.35□□□□□ -1.07
CDH13-204ENST00000539548 A0A1B0GV50 99 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 hCG_38984A0A1B0GV85 526 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 GJE1A6NN92 205 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 ZNF732B4DXR9 585 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 H3BQ15 152 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms