RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 INPP5EQ9NRR6 644 aa17.94■□□□□ 0.46
SCARB1-206ENST00000539320 MYRFQ9Y2G1 1151 aa17.94■□□□□ 0.46
SCARB1-206ENST00000539320 GSTK1Q9Y2Q3 226 aa17.94■□□□□ 0.46
SCARB1-206ENST00000539320 PCDHGB5Q9Y5G0 923 aa17.94■□□□□ 0.46
SCARB1-206ENST00000539320 IGHV2-26A0A0B4J1V2 119 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 MEGF11A6BM72 1044 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 KDM4BO94953 1096 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 FADS2O95864 444 aaKnown RBP17.93■□□□□ 0.46
SCARB1-206ENST00000539320 CSF1P09603 554 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 ERP29P30040 261 aaKnown RBP17.93■□□□□ 0.46
SCARB1-206ENST00000539320 MINOS1Q5TGZ0 78 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 TRAPPC6BQ86SZ2 158 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 PQLC1Q8N2U9 271 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 FAM110DQ8TAY7 271 aaPredicted RBP17.93■□□□□ 0.46
SCARB1-206ENST00000539320 ZCCHC4Q9H5U6 513 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 S100A14Q9HCY8 104 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 PITPNC1Q9UKF7 332 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 FOXJ3Q9UPW0 622 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 MINOS1-NBL1R4GNA1 71 aa17.93■□□□□ 0.46
SCARB1-206ENST00000539320 PRKDCP78527 4128 aaKnown RBP17.92■□□□□ 0.46
SCARB1-206ENST00000539320 A6NDX4 124 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 SH2D1BO14796 132 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 OR2H2O95918 312 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 RAB40BQ12829 278 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 MRPL28Q13084 256 aaKnown RBP17.92■□□□□ 0.46
SCARB1-206ENST00000539320 RNF144BQ7Z419 303 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 SAXO1Q8IYX7 474 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 RHOXF1Q8NHV9 184 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 SLC29A1Q99808 456 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 COMMD4Q9H0A8 199 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 TMEM133Q9H2Q1 129 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 ZNF702PQ9H963 129 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 ISG20L2Q9H9L3 353 aaKnown RBP17.92■□□□□ 0.46
SCARB1-206ENST00000539320 AMBNQ9NP70 447 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 ERVK13-1Q9NX77 482 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 UBE2J1Q9Y385 318 aaPredicted RBP17.92■□□□□ 0.46
SCARB1-206ENST00000539320 KIAA2026Q5HYC2 2103 aa17.92■□□□□ 0.46
SCARB1-206ENST00000539320 TMEM212A6NML5 194 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 F2RL2O00254 374 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 EBAG9O00559 213 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 RPSAP08865 295 aaKnown RBP17.91■□□□□ 0.46
SCARB1-206ENST00000539320 CCDC159P0C7I6 412 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 RAB13P51153 203 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 DYNLT3P51808 116 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 ZBTB49Q6ZSB9 765 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 TMEM219Q86XT9 240 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 NDNFQ8TB73 568 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 ZNF649Q9BS31 505 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 CLEC7AQ9BXN2 247 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 RHOFQ9HBH0 211 aa17.91■□□□□ 0.46
SCARB1-206ENST00000539320 TRGV10A0A0A0MS01 117 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 LOC100130705A0A1B0GUX0 176 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 FUOMA2VDF0 154 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 SULT1B1O43704 296 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 ZFPL1O95159 310 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 HCKP08631 526 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 VSIG10L2P0DP72 767 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 ZNF44P15621 663 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 CCBE1Q6UXH8 406 aaPredicted RBP17.9■□□□□ 0.46
SCARB1-206ENST00000539320 C11orf44Q8N8P7 122 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 OR52I1Q8NGK6 324 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 TSEN15Q8WW01 171 aaKnown RBP17.9■□□□□ 0.46
SCARB1-206ENST00000539320 CFHR4Q92496 578 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 GAL3ST2Q9H3Q3 398 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 DHDHQ9UQ10 334 aa17.9■□□□□ 0.46
SCARB1-206ENST00000539320 E9PI62 339 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 MMP23AO75900 390 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 ALX3O95076 343 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 GBX2P52951 348 aaPredicted RBP17.89■□□□□ 0.45
SCARB1-206ENST00000539320 ZP1P60852 638 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 SLC34A1Q06495 639 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 PRAMEF5Q5TYX0 476 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 Q8N2B8 174 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 PARP16Q8N5Y8 322 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 OR5AK2Q8NH90 309 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 APH1BQ8WW43 257 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 PDCD1LG2Q9BQ51 273 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 FAM118AQ9NWS6 357 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 RPL36Q9Y3U8 105 aaKnown RBP17.89■□□□□ 0.45
SCARB1-206ENST00000539320 HILPDAQ9Y5L2 63 aa17.89■□□□□ 0.45
SCARB1-206ENST00000539320 RRP9O43818 475 aaKnown RBP17.88■□□□□ 0.45
SCARB1-206ENST00000539320 JUNBP17275 347 aaPredicted RBP17.88■□□□□ 0.45
SCARB1-206ENST00000539320 LMO1P25800 156 aa17.88■□□□□ 0.45
SCARB1-206ENST00000539320 SERPINA12Q8IW75 414 aa17.88■□□□□ 0.45
SCARB1-206ENST00000539320 CHST4Q8NCG5 386 aa17.88■□□□□ 0.45
SCARB1-206ENST00000539320 OR5D14Q8NGL3 314 aa17.88■□□□□ 0.45
SCARB1-206ENST00000539320 OR4P4Q8NGL7 312 aa17.88■□□□□ 0.45
SCARB1-206ENST00000539320 HAVCR2Q8TDQ0 301 aa17.88■□□□□ 0.45
SCARB1-206ENST00000539320 MRPS18AQ9NVS2 196 aaKnown RBP17.88■□□□□ 0.45
SCARB1-206ENST00000539320 ERICH4A6NGS2 130 aa17.87■□□□□ 0.45
SCARB1-206ENST00000539320 CSN2P05814 226 aa17.87■□□□□ 0.45
SCARB1-206ENST00000539320 TMEM225BP0DP42 221 aa17.87■□□□□ 0.45
SCARB1-206ENST00000539320 HTR1DP28221 377 aa17.87■□□□□ 0.45
SCARB1-206ENST00000539320 AESQ08117 197 aa17.87■□□□□ 0.45
SCARB1-206ENST00000539320 IL18R1Q13478 541 aa17.87■□□□□ 0.45
SCARB1-206ENST00000539320 HABP2Q14520 560 aaPredicted RBP17.87■□□□□ 0.45
SCARB1-206ENST00000539320 KISS1Q15726 138 aa17.87■□□□□ 0.45
SCARB1-206ENST00000539320 ZNF691Q5VV52 312 aa17.87■□□□□ 0.45
SCARB1-206ENST00000539320 LPCAT4Q643R3 524 aa17.87■□□□□ 0.45
SCARB1-206ENST00000539320 HIST2H2BDQ6DRA6 164 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms