RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 MICBQ29980 383 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 PAN3Q58A45 887 aaKnown RBP12.99□□□□□ -0.33
VAMP1-207ENST00000539047 C11orf71Q6IPW1 123 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 C6orf201Q7Z4U5 140 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 PEG10Q86TG7 708 aaKnown RBP12.99□□□□□ -0.33
VAMP1-207ENST00000539047 ZCCHC24Q8N2G6 241 aaKnown RBP12.99□□□□□ -0.33
VAMP1-207ENST00000539047 OR52I2Q8NH67 350 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 PPP1R35Q8TAP8 253 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 SETD6Q8TBK2 473 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 COX4I2Q96KJ9 171 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 CHMP1AQ9HD42 196 aaPredicted RBP12.99□□□□□ -0.33
VAMP1-207ENST00000539047 WIPI2Q9Y4P8 454 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 DOPEY1Q5JWR5 2465 aa12.99□□□□□ -0.33
VAMP1-207ENST00000539047 ARFGEF3Q5TH69 2177 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 UNC79Q9P2D8 2635 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 TRAV38-1A0A0B4J264 116 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 FOXI3A8MTJ6 420 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-207ENST00000539047 H7C1Q1 480 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 H7C417 338 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 WNT9BO14905 357 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 SOD3P08294 240 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 MELTFP08582 738 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 MUC1P15941 1255 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-207ENST00000539047 DUSP1P28562 367 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 GDNFP39905 211 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 PLAC9Q5JTB6 97 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 STEAP3Q658P3 488 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 MZT2BQ6NZ67 158 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 GCSAMQ8N6F7 178 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 CCL17Q92583 94 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 GCDHQ92947 438 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-207ENST00000539047 YIPF5Q969M3 257 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 PSMG3-AS1Q96PY0 264 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 SDHCQ99643 169 aaPredicted RBP12.98□□□□□ -0.33
VAMP1-207ENST00000539047 CMSS1Q9BQ75 279 aaKnown RBP12.98□□□□□ -0.33
VAMP1-207ENST00000539047 C12orf4Q9NQ89 552 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 DLL4Q9NR61 685 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 TMEM106BQ9NUM4 274 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 IL36RNQ9UBH0 155 aa12.98□□□□□ -0.33
VAMP1-207ENST00000539047 CACNA1DQ01668 2161 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 NOTCH2Q04721 2471 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 FAM221AA4D161 298 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 OOEPA6NGQ2 149 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 OR2AT4A6NND4 320 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 SIRPB1O00241 398 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 OR2H2O95918 312 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 CYB5R3P00387 301 aaPredicted RBP12.97□□□□□ -0.33
VAMP1-207ENST00000539047 CD80P33681 288 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 TMEM50BP56557 158 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 BAK1Q16611 211 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 RGS21Q2M5E4 152 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 HIST2H2BCQ6DN03 193 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 LYSMD2Q8IV50 215 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 GPX8Q8TED1 209 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 NUDCD2Q8WVJ2 157 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 DEDD2Q8WXF8 326 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 ST8SIA4Q92187 359 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 TRIM63Q969Q1 353 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 CCL19Q99731 98 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 DPCDQ9BVM2 203 aaPredicted RBP12.97□□□□□ -0.33
VAMP1-207ENST00000539047 WDR13Q9H1Z4 485 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 RIMS4Q9H426 269 aaPredicted RBP12.97□□□□□ -0.33
VAMP1-207ENST00000539047 ZNF701Q9NV72 531 aaPredicted RBP12.97□□□□□ -0.33
VAMP1-207ENST00000539047 RCC2Q9P258 522 aaKnown RBP12.97□□□□□ -0.33
VAMP1-207ENST00000539047 MTFP1Q9UDX5 166 aa12.97□□□□□ -0.33
VAMP1-207ENST00000539047 ZNF107Q9UII5 783 aaPredicted RBP12.97□□□□□ -0.33
VAMP1-207ENST00000539047 ICE1Q9Y2F5 2266 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 UBE2QL1A1L167 161 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 RFPL4AA6NLU0 287 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 RFPL4AL1F8VTS6 287 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 LGALS8O00214 317 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 HSPB6O14558 160 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 LHBP01229 141 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 CD8AP01732 235 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 PTHLHP12272 177 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 EGR1P18146 543 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 GABRA2P47869 451 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 KCNJ3P48549 501 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 TAS2R19P59542 299 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 MRPS11P82912 194 aaKnown RBP12.96□□□□□ -0.33
VAMP1-207ENST00000539047 GUCA2AQ02747 115 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 PDCD1Q15116 288 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 SPRNQ5BIV9 151 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 SIGIRRQ6IA17 410 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 LURAP1LQ8IV03 231 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 ASCC1Q8N9N2 400 aaKnown RBP12.96□□□□□ -0.33
VAMP1-207ENST00000539047 POC5Q8NA72 575 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 SUMF2Q8NBJ7 301 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 RDH5Q92781 318 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 SEH1LQ96EE3 360 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 TIMD4Q96H15 378 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 SULT4A1Q9BR01 284 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 C7orf50Q9BRJ6 194 aaKnown RBP12.96□□□□□ -0.33
VAMP1-207ENST00000539047 FAAP24Q9BTP7 215 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 CHST6Q9GZX3 395 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 SEBOXQ9HB31 216 aaPredicted RBP12.96□□□□□ -0.33
VAMP1-207ENST00000539047 MYOZ1Q9NP98 299 aaPredicted RBP12.96□□□□□ -0.33
VAMP1-207ENST00000539047 ETAA1Q9NY74 926 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 TREM2Q9NZC2 230 aa12.96□□□□□ -0.33
VAMP1-207ENST00000539047 AK3Q9UIJ7 227 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms