RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 LMO1P25800 156 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 OR3A1P47881 315 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 ETV1P50549 477 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 P2RX3P56373 397 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 LGALS4P56470 323 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 ZP1P60852 638 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 ADARB1P78563 741 aaKnown RBP9.4□□□□□ -0.9
RTN3-209ENST00000538995 EDDM3AQ14507 147 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 KISS1Q15726 138 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 LRRC36Q1X8D7 754 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 CRIP3Q6Q6R5 217 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 ZNF782Q6ZMW2 699 aaPredicted RBP9.4□□□□□ -0.9
RTN3-209ENST00000538995 LIAT1Q6ZQX7 453 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 TCF23Q7RTU1 214 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 DHRSXQ8N5I4 330 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 OR11H6Q8NGC7 330 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 OR52N4Q8NGI2 321 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 OR52N1Q8NH53 320 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 LINC01006Q8NI28 216 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 CNIH3Q8TBE1 160 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 RFT1Q96AA3 541 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 RAB18Q9NP72 206 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 TBL2Q9Y4P3 447 aaKnown RBP9.4□□□□□ -0.9
RTN3-209ENST00000538995 RNF114Q9Y508 228 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 FAM90A8PA6NJQ4 464 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 H3BUX3 64 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 MAGEB3O15480 346 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 CLPXO76031 633 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 CLIC3O95833 236 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 OR2H2O95918 312 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 MTNR1BP49286 362 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 OGFRL1Q5TC84 451 aaPredicted RBP9.39□□□□□ -0.91
RTN3-209ENST00000538995 ZNF626Q68DY1 528 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 ELP2Q6IA86 826 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 Q6ZSV7 163 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 PXT1Q8NFP0 134 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 OR5D18Q8NGL1 313 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 C17orf50Q8WW18 174 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 RGP1Q92546 391 aaPredicted RBP9.39□□□□□ -0.91
RTN3-209ENST00000538995 SMIM19Q96E16 107 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 TMEM80Q96HE8 168 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 SPACA5Q96QH8 159 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 SSX3Q99909 188 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 CITED1Q99966 193 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 CHST6Q9GZX3 395 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 VCXQ9H320 206 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 CHCHD3Q9NX63 227 aaKnown RBP9.39□□□□□ -0.91
RTN3-209ENST00000538995 BABAM2Q9NXR7 383 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 GSTK1Q9Y2Q3 226 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 UBE2J1Q9Y385 318 aaPredicted RBP9.39□□□□□ -0.91
RTN3-209ENST00000538995 SESN1Q9Y6P5 492 aa9.39□□□□□ -0.91
RTN3-209ENST00000538995 EFCAB10A6NFE3 127 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 SIRPB1O00241 398 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 OGG1O15527 345 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 TMEM225BP0DP42 221 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 DUSP1P28562 367 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 CAPGP40121 348 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 GTF2A1P52655 376 aaPredicted RBP9.38□□□□□ -0.91
RTN3-209ENST00000538995 SNU13P55769 128 aaKnown RBP9.38□□□□□ -0.91
RTN3-209ENST00000538995 PROK1P58294 105 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 MINOS1Q5TGZ0 78 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 OR2G6Q5TZ20 316 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 XAF1Q6GPH4 301 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 BRICD5Q6PL45 260 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 C8orf59Q8N0T1 100 aaPredicted RBP9.38□□□□□ -0.91
RTN3-209ENST00000538995 DTX3Q8N9I9 347 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 TMEM106AQ96A25 262 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 MALSU1Q96EH3 234 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 CDCA4Q9BXL8 241 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 GAL3ST2Q9H3Q3 398 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 RANBP3Q9H6Z4 567 aaPredicted RBP9.38□□□□□ -0.91
RTN3-209ENST00000538995 CNOT2Q9NZN8 540 aaKnown RBP9.38□□□□□ -0.91
RTN3-209ENST00000538995 ZNF281Q9Y2X9 895 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 MINOS1-NBL1R4GNA1 71 aa9.38□□□□□ -0.91
RTN3-209ENST00000538995 TRGV10A0A0A0MS01 117 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 IGHV2-26A0A0B4J1V2 119 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 ALDOBP05062 364 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 ARG1P05089 322 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 ZNF44P15621 663 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 SOX2P48431 317 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 DYNLT3P51808 116 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 TAS2R43P59537 309 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 PPP3R1P63098 170 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 IL13RA2Q14627 380 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 DMKNQ6E0U4 476 aaPredicted RBP9.37□□□□□ -0.91
RTN3-209ENST00000538995 ASPHD2Q6ICH7 369 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 Q6P435 159 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 C11orf88Q6PI97 169 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 RNF144BQ7Z419 303 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 TRAPPC6BQ86SZ2 158 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 TPRX1Q8N7U7 411 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 Q8NFD4 153 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 OR51A2Q8NGJ7 313 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 FBLIM1Q8WUP2 373 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 CORO2AQ92828 525 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 GPER1Q99527 375 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 PPA2Q9H2U2 334 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 TMEM138Q9NPI0 162 aa9.37□□□□□ -0.91
RTN3-209ENST00000538995 TAS2R4Q9NYW5 299 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms