RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828		Q499Y3	187 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	NHLRC3	Q5JS37	347 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	XAF1	Q6GPH4	301 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	GDPGP1	Q6ZNW5	385 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	STX19	Q8N4C7	294 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	C3orf56	Q8N813	242 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	DTX3	Q8N9I9	347 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CORO2A	Q92828	525 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	GHSR	Q92847	366 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	PGLYRP3	Q96LB9	341 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CDCA4	Q9BXL8	241 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	EXOSC4	Q9NPD3	245 aa	Known RBP	10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	PCDHB16	Q9NRJ7	776 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TAS2R3	Q9NYW6	316 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CLEC2D	Q9UHP7	191 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ERGIC3	Q9Y282	383 aa		10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	UBE2J1	Q9Y385	318 aa	Predicted RBP	10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SOX21	Q9Y651	276 aa	Predicted RBP	10.05	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MDFIC2	A0A1B0GVS7	189 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	BTBD17	A6NE02	478 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	FAM90A8P	A6NJQ4	464 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ANKRD65	E5RJM6	399 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MYL12B	O14950	172 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	PSPN	O60542	156 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ZNF780A	O75290	641 aa	Predicted RBP	10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR2H2	O95918	312 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	PAH	P00439	452 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TMEM225B	P0DP42	221 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	IGFBP3	P17936	291 aa	Predicted RBP	10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SAA4	P35542	130 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	RPS11	P62280	158 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	GPR50	Q13585	617 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ZNF273	Q14593	569 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	GRK1	Q15835	563 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	C6orf141	Q5SZD1	244 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ASPHD2	Q6ICH7	369 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SHISA2	Q6UWI4	295 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	NANOGP1	Q8N7R0	232 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR11H6	Q8NGC7	330 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR52N4	Q8NGI2	321 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR13D1	Q8NGV5	346 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR4F5	Q8NH21	305 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SGMS2	Q8NHU3	365 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MYDGF	Q969H8	173 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ZNF714	Q96N38	554 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CHIA	Q9BZP6	476 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	IFT22	Q9H7X7	185 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SCN3B	Q9NY72	215 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	NKX1-2	Q9UD57	310 aa	Predicted RBP	10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	FOXJ3	Q9UPW0	622 aa		10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TBL2	Q9Y4P3	447 aa	Known RBP	10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.04	□□□□□ -0.8
CLTCL1-205	ENST00000538828	KIAA2026	Q5HYC2	2103 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	TRBV5-7	A0A0A0MS05	114 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MEIOC	A2RUB1	952 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	FAM181B	A6NEQ2	426 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	VGLL3	A8MV65	326 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ANGPTL7	O43827	346 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	XPNPEP2	O43895	674 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	LALBA	P00709	142 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CDK1	P06493	297 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	IGHV1-8	P0DP01	117 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MAPK3	P27361	379 aa	Predicted RBP	10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	C21orf33	P30042	268 aa	Predicted RBP	10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	BDKRB2	P30411	391 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	PTGFR	P43088	359 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR3A1	P47881	315 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	P2RX3	P56373	397 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	EDDM3B	P56851	147 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	RIPK1	Q13546	671 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	GPR176	Q14439	515 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR52W1	Q6IF63	320 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828		Q6P435	159 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	LIAT1	Q6ZQX7	453 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	AHSA2	Q719I0	299 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	LINC00596	Q86U02	117 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MS4A15	Q8N5U1	240 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	BPIFB6	Q8NFQ5	453 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	OR4M1	Q8NGD0	313 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	FOXRED1	Q96CU9	486 aa	Predicted RBP	10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	DUX5	Q96PT3	197 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	SPACA5	Q96QH8	159 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	MND1	Q9BWT6	205 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	ANKRD60	Q9BZ19	345 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	CKLF	Q9UBR5	152 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	VPREB3	Q9UKI3	123 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828	GSTK1	Q9Y2Q3	226 aa		10.03	□□□□□ -0.8
CLTCL1-205	ENST00000538828		A0A0G2JK05	382 aa		10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828	ODF3B	A8MYP8	253 aa		10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828		H0YHG0	523 aa		10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828	HAX1	O00165	279 aa		10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828	GABRP	O00591	440 aa		10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828	CCL3L1	P16619	93 aa		10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828	MYF6	P23409	242 aa		10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828	GABRR1	P24046	479 aa		10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828	ZNF93	P35789	620 aa	Predicted RBP	10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828	TGFBR2	P37173	567 aa		10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828	SOX2	P48431	317 aa		10.02	□□□□□ -0.81
CLTCL1-205	ENST00000538828	LGALS4	P56470	323 aa		10.02	□□□□□ -0.81

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