RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 LILRA5A6NI73 299 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 PRSS1P07477 247 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 CD82P27701 267 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 OR3A4PP47883 348 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 RNPS1Q15287 305 aaKnown RBP6.15□□□□□ -1.43
SORT1-209ENST00000538502 C6orf201Q7Z4U5 140 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 OR1N1Q8NGS0 311 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 COPS9Q8WXC6 57 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 GRAMD2BQ96HH9 432 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 FOXB1Q99853 325 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 C12orf49Q9H741 205 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 PPP1R3EQ9H7J1 279 aa6.15□□□□□ -1.43
SORT1-209ENST00000538502 ERRFI1Q9UJM3 462 aaPredicted RBP6.15□□□□□ -1.43
SORT1-209ENST00000538502 SNURFLB1AK76 121 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 TNFSF11O14788 317 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 DNPH1O43598 174 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 LANCL1O43813 399 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 NGFP01138 241 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 CXCL2P19875 107 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 OPRK1P41145 380 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 KCNAB1Q14722 419 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 PSMG4Q5JS54 123 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 VAX1Q5SQQ9 334 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 ARL6IP6Q8N6S5 226 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 C17orf47Q8NEP4 570 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 MOB3AQ96BX8 217 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 SLC25A33Q9BSK2 321 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 SAP30LQ9HAJ7 183 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 RNF186Q9NXI6 227 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 MPC1Q9Y5U8 109 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 BCORQ6W2J9 1755 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 A0A1W2PQD3 144 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 CDK2AP1O14519 115 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 FGF8P55075 233 aaPredicted RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 INSM1Q01101 510 aaPredicted RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 FOXF1Q12946 379 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 LRRC10Q5BKY1 277 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 ORAI1Q96D31 301 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 MS4A3Q96HJ5 214 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 ZNF256Q9Y2P7 627 aaPredicted RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 PAM16Q9Y3D7 125 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 OOEPA6NGQ2 149 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 PTP4A3O75365 173 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 CA11O75493 328 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 ACAA2P42765 397 aaKnown RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 PCP4P48539 62 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 LSM6P62312 80 aaKnown RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 HFEQ30201 348 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 NUDT16L1Q9BRJ7 211 aaKnown RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 GAL3ST2Q9H3Q3 398 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 MRM2Q9UI43 246 aaKnown RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 DSPPQ9NZW4 1301 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 PLPP3O14495 311 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 MPDU1O75352 247 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 KLF7O75840 302 aaPredicted RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 HOXC4P09017 264 aaPredicted RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 MUC1P15941 1255 aaPredicted RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 LSM11P83369 360 aaKnown RBP eCLIP6.14□□□□□ -1.433e-47■■■■■ 33.9
SORT1-209ENST00000538502 EIF3IQ13347 325 aaKnown RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 CD226Q15762 336 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 HOGA1Q86XE5 327 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 ASB10Q8WXI3 467 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 CISD1Q9NZ45 108 aaKnown RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 THYN1Q9P016 225 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 MS4A18H0YCH9 400 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 K7ESM1 405 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 EIF3GO75821 320 aaKnown RBP eCLIP6.14□□□□□ -1.43
SORT1-209ENST00000538502 HLA-DQA1P01909 254 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 CRYAAP02489 173 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 GPR3P46089 330 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 YBX1P67809 324 aaKnown RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 UBE2L3P68036 154 aaKnown RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 PRICKLE4Q2TBC4 344 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 MS4A18Q3C1V0 323 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 TMEM255AQ5JRV8 349 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 SCGB1D4Q6XE38 83 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 OR8G5Q8NG78 346 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 OR13H1Q8NG92 308 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 WFDC5Q8TCV5 224 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 SARAFQ96BY9 339 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 ADAT3Q96EY9 351 aaPredicted RBP6.14□□□□□ -1.43
SORT1-209ENST00000538502 MTCH2Q9Y6C9 303 aa6.14□□□□□ -1.43
SORT1-209ENST00000538502 A0A1W2PNR3 127 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 NHLRC3Q5JS37 347 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 FNDC7Q5VTL7 733 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 FAM181AQ8N9Y4 354 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 MRPL30Q8TCC3 161 aaKnown RBP6.13□□□□□ -1.43
SORT1-209ENST00000538502 MS4A7Q9GZW8 240 aaPredicted RBP6.13□□□□□ -1.43
SORT1-209ENST00000538502 DLEC1Q9Y238 1755 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 MYO18AQ92614 2054 aaKnown RBP6.13□□□□□ -1.43
SORT1-209ENST00000538502 M0R296 226 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 CHST1O43916 411 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 FSTP19883 344 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 POLR2GP62487 172 aaKnown RBP eCLIP6.13□□□□□ -1.43
SORT1-209ENST00000538502 AQP10Q96PS8 301 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 OR6C3Q9NZP0 311 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 KCNE3Q9Y6H6 103 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 DOCK2Q92608 1830 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 AKAP11Q9UKA4 1901 aa6.13□□□□□ -1.43
SORT1-209ENST00000538502 IDSB3KWA1 339 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms