RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 COX4I2Q96KJ9 171 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 SULT4A1Q9BR01 284 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 TRAF4Q9BUZ4 470 aaPredicted RBP10.39□□□□□ -0.75
DDB1-209ENST00000537877 WDR13Q9H1Z4 485 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 IFT46Q9NQC8 304 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 ZNF581Q9P0T4 197 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 ELF5Q9UKW6 265 aaPredicted RBP10.39□□□□□ -0.75
DDB1-209ENST00000537877 USP9XQ93008 2570 aaPredicted RBP10.39□□□□□ -0.75
DDB1-209ENST00000537877 CENPXA8MT69 81 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 MCRIP1C9JLW8 97 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.39□□□□□ -0.75
DDB1-209ENST00000537877 HAX1O00165 279 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 DEGS1O15121 323 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 PLA2G10O15496 165 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 LYRM1O43325 122 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 OR2H2O95918 312 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 HAND1O96004 215 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 EGR1P18146 543 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 DTYMKP23919 212 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 DUSP1P28562 367 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 FAUP35544 74 aaKnown RBP10.39□□□□□ -0.75
DDB1-209ENST00000537877 GMFBP60983 142 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 RBM39Q14498 530 aaKnown RBP10.39□□□□□ -0.75
DDB1-209ENST00000537877 SHEQ5VZ18 495 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 MZT2BQ6NZ67 158 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 ZCCHC24Q8N2G6 241 aaKnown RBP10.39□□□□□ -0.75
DDB1-209ENST00000537877 TMEM229BQ8NBD8 167 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 CHPT1Q8WUD6 406 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 CMSS1Q9BQ75 279 aaKnown RBP10.39□□□□□ -0.75
DDB1-209ENST00000537877 OCSTAMPQ9BR26 566 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 FAAP24Q9BTP7 215 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 CHST6Q9GZX3 395 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 UBTD1Q9HAC8 227 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 C12orf4Q9NQ89 552 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 NLKQ9UBE8 527 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 DNAJB11Q9UBS4 358 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 AK3Q9UIJ7 227 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 CACNG2Q9Y698 323 aa10.39□□□□□ -0.75
DDB1-209ENST00000537877 SMG1Q96Q15 3661 aaKnown RBP10.38□□□□□ -0.75
DDB1-209ENST00000537877 CHD6Q8TD26 2715 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 ARFGEF3Q5TH69 2177 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 TRAV24A0A0B4J272 114 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 IGHV1-69-2A0A0G2JMI3 117 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 LINC00854A0A1B0GVQ3 168 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 MEIS3P1A6NDR6 274 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 NAP1L6A6NFF2 107 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 CD8AP01732 235 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 SOD3P08294 240 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 NAT1P18440 290 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 TBPP20226 339 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 LMO1P25800 156 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 MDH2P40926 338 aaKnown RBP10.38□□□□□ -0.75
DDB1-209ENST00000537877 TAS2R19P59542 299 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 PDCD1Q15116 288 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 TRIM16LQ309B1 348 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 PAN3Q58A45 887 aaKnown RBP10.38□□□□□ -0.75
DDB1-209ENST00000537877 SUMF2Q8NBJ7 301 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 VRK1Q99986 396 aaPredicted RBP10.38□□□□□ -0.75
DDB1-209ENST00000537877 DPCDQ9BVM2 203 aaPredicted RBP10.38□□□□□ -0.75
DDB1-209ENST00000537877 RAB1BQ9H0U4 201 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 C11orf54Q9H0W9 315 aaPredicted RBP10.38□□□□□ -0.75
DDB1-209ENST00000537877 OR14J1Q9UGF5 321 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 EDARQ9UNE0 448 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 WIPI2Q9Y4P8 454 aa10.38□□□□□ -0.75
DDB1-209ENST00000537877 RELNP78509 3460 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 ROS1P08922 2347 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 UBE2QL1A1L167 161 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 OR2AT4A6NND4 320 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 POM121CA8CG34 1229 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 VGLL3A8MV65 326 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 SIRPB1O00241 398 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 SLC33A1O00400 549 aaPredicted RBP10.37□□□□□ -0.75
DDB1-209ENST00000537877 CLDN1O95832 211 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 CYB5R3P00387 301 aaPredicted RBP10.37□□□□□ -0.75
DDB1-209ENST00000537877 AKAIN1P0CW23 69 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 COX6B1P14854 86 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 MUC1P15941 1255 aaPredicted RBP10.37□□□□□ -0.75
DDB1-209ENST00000537877 CD80P33681 288 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 KCNJ3P48549 501 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 OXA1LQ15070 435 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 ACTBL2Q562R1 376 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 TEX36Q5VZQ5 186 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 C20orf204Q6ZNR8 217 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 HOGA1Q86XE5 327 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 BOLLQ8N9W6 283 aaKnown RBP10.37□□□□□ -0.75
DDB1-209ENST00000537877 NEK7Q8TDX7 302 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 NEU4Q8WWR8 484 aaPredicted RBP10.37□□□□□ -0.75
DDB1-209ENST00000537877 RIMS4Q9H426 269 aaPredicted RBP10.37□□□□□ -0.75
DDB1-209ENST00000537877 TMEM106BQ9NUM4 274 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 ZNF701Q9NV72 531 aaPredicted RBP10.37□□□□□ -0.75
DDB1-209ENST00000537877 TREM2Q9NZC2 230 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 CACNA1DQ01668 2161 aa10.37□□□□□ -0.75
DDB1-209ENST00000537877 PKDREJQ9NTG1 2253 aa10.36□□□□□ -0.75
DDB1-209ENST00000537877 ICE1Q9Y2F5 2266 aa10.36□□□□□ -0.75
DDB1-209ENST00000537877 DYSFO75923 2080 aa10.36□□□□□ -0.75
DDB1-209ENST00000537877 ADGRG4Q8IZF6 3080 aa10.36□□□□□ -0.75
DDB1-209ENST00000537877 OOEPA6NGQ2 149 aa10.36□□□□□ -0.75
DDB1-209ENST00000537877 RFPL4AA6NLU0 287 aa10.36□□□□□ -0.75
DDB1-209ENST00000537877 ZNF736B4DX44 427 aaPredicted RBP10.36□□□□□ -0.75
DDB1-209ENST00000537877 C3orf80F5H4A9 247 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms