RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 RFPL4AA6NLU0 287 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 RFPL4AL1F8VTS6 287 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 F8VVB4 439 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 F8VWA3 439 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 LYNX1G3V0Z9 82 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 WNT9BO14905 357 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 CLPXO76031 633 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 HAND1O96004 215 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 PAHP00439 452 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 LYNX1P0DP58 116 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 EGR1P18146 543 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 TALDO1P37837 337 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 NR4A2P43354 598 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 IL13RA1P78552 427 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 ZMYND11Q15326 602 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 CLEC12BQ2HXU8 276 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 CNPY1Q3B7I2 92 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 BAIAP2L2Q6UXY1 529 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 SAMD12Q8N8I0 201 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 ZNF488Q96MN9 340 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 TMEM246Q9BRR3 403 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 BANF2Q9H503 90 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.58□□□□□ -0.24
VAMP1-205ENST00000535927 ZNF222Q9UK12 451 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 PCDHB10Q9UN67 800 aa13.58□□□□□ -0.24
VAMP1-205ENST00000535927 IGKV1D-17A0A075B6S4 117 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 C3orf80F5H4A9 247 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 H7C1Q1 480 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 SIGLEC5O15389 551 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 XRCC3O43542 346 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 PDCD6O75340 191 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 LY6HO94772 140 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 CSN2P05814 226 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 PTBP1P26599 531 aaKnown RBP eCLIP13.57□□□□□ -0.24
VAMP1-205ENST00000535927 IKZF1Q13422 519 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 CARTPTQ16568 116 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 SFRP4Q6FHJ7 346 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-205ENST00000535927 Q6P435 159 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 METAP1DQ6UB28 335 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-205ENST00000535927 TGIF2LYQ8IUE0 185 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 OR10R2Q8NGX6 335 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 RAB39BQ96DA2 213 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 WDFY2Q96P53 400 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 ATG5Q9H1Y0 275 aa13.57□□□□□ -0.24
VAMP1-205ENST00000535927 RIMS4Q9H426 269 aaPredicted RBP13.57□□□□□ -0.24
VAMP1-205ENST00000535927 PATZ1Q9HBE1 687 aaKnown RBP13.57□□□□□ -0.24
VAMP1-205ENST00000535927 RCC2Q9P258 522 aaKnown RBP13.57□□□□□ -0.24
VAMP1-205ENST00000535927 SERPINE3A8MV23 424 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 MCRIP1C9JLW8 97 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 K7N7A8 449 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 RAB27BO00194 218 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 GEMIN2O14893 280 aaKnown RBP13.56□□□□□ -0.24
VAMP1-205ENST00000535927 RGS5O15539 181 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 OR7C1O76099 320 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-205ENST00000535927 ECDO95905 644 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-205ENST00000535927 OR2H2O95918 312 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 GSTP1P09211 210 aaKnown RBP13.56□□□□□ -0.24
VAMP1-205ENST00000535927 ZNF44P15621 663 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 BLVRBP30043 206 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-205ENST00000535927 CD80P33681 288 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 MNDAP41218 407 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 PITPNAQ00169 270 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 TAF9Q16594 264 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 LRRC10Q5BKY1 277 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 OR10K2Q6IF99 312 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 Q6ZTK2 550 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 DEFB108BQ8NET1 73 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 OR5H6Q8NGV6 325 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 NEIL1Q96FI4 390 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-205ENST00000535927 NKX3-1Q99801 234 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-205ENST00000535927 C6orf62Q9GZU0 229 aaPredicted RBP13.56□□□□□ -0.24
VAMP1-205ENST00000535927 DCAF16Q9NXF7 216 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 ITGB1BP2Q9UKP3 347 aa13.56□□□□□ -0.24
VAMP1-205ENST00000535927 NF1P21359 2839 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 A0A0B4J203 849 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 A0A1W2PP11 408 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 ISPDA4D126 451 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 MGST3O14880 152 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 NDUFB3O43676 98 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 WNT2P09544 360 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 ERP29P30040 261 aaKnown RBP13.55□□□□□ -0.24
VAMP1-205ENST00000535927 GABRA2P47869 451 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 VEGFCP49767 419 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 PNLIPRP3Q17RR3 467 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 PIGYQ3MUY2 71 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 CMTM4Q8IZR5 234 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 CD177Q8N6Q3 437 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 OR8B3Q8NGG8 313 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 SLC25A38Q96DW6 304 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 RAB3CQ96E17 227 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 OR8B2Q96RD0 313 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 BPESC1Q9GZL8 116 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 PLEKHJ1Q9NW61 149 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 LPAR3Q9UBY5 353 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 OR14J1Q9UGF5 321 aa13.55□□□□□ -0.24
VAMP1-205ENST00000535927 CEACAM18A8MTB9 384 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 FOXI3A8MTJ6 420 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-205ENST00000535927 FAM25AB3EWG3 89 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 FAM25CB3EWG5 89 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 FAM25GB3EWG6 89 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms