RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 AGPAT4Q9NRZ5 378 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 DEPPQ9NTK1 212 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF337Q9Y3M9 751 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 CROCCQ5TZA2 2017 aa2.86□□□□□ -1.95
CSMD3-210ENST00000534172 MYO5AQ9Y4I1 1855 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 IGHV3-38A0A0C4DH36 116 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 EXOC1LA0A1B0GW35 172 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 TRAPPC13A5PLN9 417 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 COLCA2A8K830 154 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 EFCAB9A8MZ26 197 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 GFYI3L273 518 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SSNA1O43805 119 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SOX15O60248 233 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ZG16O60844 167 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SC5DO75845 299 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ZFAND5O76080 213 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 TNFSF15O95150 251 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 HPP00738 406 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CST4P01036 141 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 C1GALT1C1LP0DN25 315 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 GZMHP20718 246 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 S100A7P31151 101 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CEACAM3P40198 252 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 RBM34P42696 430 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 EMDP50402 254 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CRYBA4P53673 196 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 UCNP55089 124 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 OR2B8PP59922 312 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 FKBP3Q00688 224 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 NDUFA9Q16795 377 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SLC22A6Q4U2R8 563 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 COL5A1-AS1Q5SY13 56 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SAMD13Q5VXD3 122 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 APOOLQ6UXV4 268 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 NUFIP2Q7Z417 695 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CALHM1Q8IU99 346 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CBLN2Q8IUK8 224 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SAMD12Q8N8I0 201 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 C4orf32Q8N8J7 132 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 OR5L1Q8NGL2 311 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 OR10R2Q8NGX6 335 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 GPR151Q8TDV0 419 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ASB13Q8WXK3 278 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 RGP1Q92546 391 aaPredicted RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 RDH12Q96NR8 316 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CLCC1Q96S66 551 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SDHCQ99643 169 aaPredicted RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CABLES2Q9BTV7 478 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ISYNA1Q9NPH2 558 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 GPATCH2LQ9NWQ4 482 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 THYN1Q9P016 225 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 GALPQ9UBC7 116 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 PCYT1BQ9Y5K3 369 aaPredicted RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 URGCP-MRPS24S4R325 110 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 LRRC37AA6NMS7 1700 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 TCRBV3S1A0A5B6 114 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 F6UZH7 168 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 RPL36A-HNRNPH2H7BZ11 118 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 UBFD1O14562 309 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 B4GALT5O43286 388 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 OR2T1O43869 369 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 KLRC4O43908 158 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CDC40O60508 579 aaKnown RBP eCLIP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SLC19A2O60779 497 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 RP2O75695 350 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 FARS2O95363 451 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 PDYNP01213 254 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 IFNA5P01569 189 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CD5P06127 495 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CSF3P09919 207 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 OR10J4P0C629 311 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 PRKACGP22612 351 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 IDH2P48735 452 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 AQP5P55064 265 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CDKN2DP55273 166 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ADARB1P78563 741 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CDK6Q00534 326 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 C2orf80Q0P641 193 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SF3A2Q15428 464 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 TNXAQ16473 311 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CYP51A1Q16850 503 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 LGALSLQ3ZCW2 172 aaPredicted RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 EIPR1Q53HC9 387 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 C5orf47Q569G3 176 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SAMD4BQ5PRF9 694 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 STUMQ69YW2 141 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 EIF5AL1Q6IS14 154 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF774Q6NX45 483 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 DNM1P34Q6PK57 102 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 LCLAT1Q6UWP7 414 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 PAMR1Q6UXH9 720 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF546Q86UE3 836 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 BOD1L2Q8IYS8 172 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 NECAP1Q8NC96 275 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 OR2AP1Q8NGE2 309 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 OR10K1Q8NGX5 313 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 C11orf45Q8TAV5 145 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ASB17Q8WXJ9 295 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 MRPS31Q92665 395 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms