RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 CYYR1Q96J86 154 aa10.99□□□□□ -0.65
CMTM1-219ENST00000533953 SNX22Q96L94 193 aa10.99□□□□□ -0.65
CMTM1-219ENST00000533953 MGLLQ99685 303 aa10.99□□□□□ -0.65
CMTM1-219ENST00000533953 Q9H521 79 aa10.99□□□□□ -0.65
CMTM1-219ENST00000533953 A0A0G2JK05 382 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 RNASEK-C17orf49H0YIS7 233 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 HSPB6O14558 160 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 SH2D1BO14796 132 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 DEGS1O15121 323 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 ZNF44P15621 663 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 FSTP19883 344 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 OR3A1P47881 315 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 TPBGQ13641 420 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 RSU1Q15404 277 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 GRK1Q15835 563 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 DEFB112Q30KQ8 113 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 GPR157Q5UAW9 335 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 ASCL4Q6XD76 172 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 TMEM91Q6ZNR0 172 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 PHC2Q8IXK0 858 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 JAGN1Q8N5M9 183 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 C11orf42Q8N5U0 333 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 PXT1Q8NFP0 134 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 ZNF418Q8TF45 676 aaPredicted RBP10.98□□□□□ -0.65
CMTM1-219ENST00000533953 TAF15Q92804 592 aaKnown RBP eCLIP10.98□□□□□ -0.65
CMTM1-219ENST00000533953 TNFRSF14Q92956 283 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 PPA2Q9H2U2 334 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 EXOSC4Q9NPD3 245 aaKnown RBP10.98□□□□□ -0.65
CMTM1-219ENST00000533953 ACOT13Q9NPJ3 140 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 TNFRSF19Q9NS68 423 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 CKLFQ9UBR5 152 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 KPTNQ9Y664 436 aa10.98□□□□□ -0.65
CMTM1-219ENST00000533953 TRBV23-1A0A0A0MS06 115 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 IGHV1-69DA0A0B4J2H0 117 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 IGHV1-69P01742 117 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 CPEP16870 476 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 SERPINA2P20848 420 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 AESQ08117 197 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 MLLT11Q13015 90 aaPredicted RBP10.97□□□□□ -0.65
CMTM1-219ENST00000533953 SSX1Q16384 188 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 C11orf91Q3C1V1 193 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 SLC22A6Q4U2R8 563 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 SPIN3Q5JUX0 258 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 HCP5Q6MZN7 132 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 BRICD5Q6PL45 260 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 FIP1L1Q6UN15 594 aaKnown RBP10.97□□□□□ -0.65
CMTM1-219ENST00000533953 ZNF782Q6ZMW2 699 aaPredicted RBP10.97□□□□□ -0.65
CMTM1-219ENST00000533953 GDPD3Q7L5L3 318 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 TCF23Q7RTU1 214 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 LRRTM1Q86UE6 522 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 LYPD6Q86Y78 171 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 CMTM4Q8IZR5 234 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 SPARTQ8N0X7 666 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 OR8H2Q8N162 312 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 MS4A15Q8N5U1 240 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 ZDHHC22Q8N966 263 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 OR4D6Q8NGJ1 314 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 C1orf147Q96MC9 270 aaPredicted RBP10.97□□□□□ -0.65
CMTM1-219ENST00000533953 FAM234AQ9H0X4 552 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 BLOC1S6Q9UL45 172 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 FOXJ3Q9UPW0 622 aa10.97□□□□□ -0.65
CMTM1-219ENST00000533953 SF3B6Q9Y3B4 125 aaKnown RBP10.97□□□□□ -0.65
CMTM1-219ENST00000533953 A0A0U1RQK1 487 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 SLC33A1O00400 549 aaPredicted RBP10.96□□□□□ -0.65
CMTM1-219ENST00000533953 SC5DO75845 299 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 PAX6P26367 422 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 GLIPR1P48060 266 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 MTNR1BP49286 362 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 DLX6P56179 175 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 HILS1P60008 231 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 FABP5Q01469 135 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 GPR50Q13585 617 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 TBCEQ15813 527 aaPredicted RBP10.96□□□□□ -0.65
CMTM1-219ENST00000533953 TUSC1Q2TAM9 212 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 ELP2Q6IA86 826 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 GLIPR1L1Q6UWM5 242 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 KIR3DL3Q8N743 410 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.96□□□□□ -0.65
CMTM1-219ENST00000533953 C17orf50Q8WW18 174 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 SUCNR1Q9BXA5 334 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 METTL9Q9H1A3 318 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 BANF2Q9H503 90 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 TCF7L1Q9HCS4 588 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 ISYNA1Q9NPH2 558 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 GLS2Q9UI32 602 aa10.96□□□□□ -0.65
CMTM1-219ENST00000533953 MRPS28Q9Y2Q9 187 aaKnown RBP10.96□□□□□ -0.65
CMTM1-219ENST00000533953 COL6A5A8TX70 2615 aa10.96□□□□□ -0.66
CMTM1-219ENST00000533953 TRAV39A0A0B4J263 110 aa10.95□□□□□ -0.66
CMTM1-219ENST00000533953 TRAV24A0A0B4J272 114 aa10.95□□□□□ -0.66
CMTM1-219ENST00000533953 M0R1W7 72 aa10.95□□□□□ -0.66
CMTM1-219ENST00000533953 SRMP19623 302 aa10.95□□□□□ -0.66
CMTM1-219ENST00000533953 PRTN3P24158 256 aa10.95□□□□□ -0.66
CMTM1-219ENST00000533953 COX7A1P24310 79 aa10.95□□□□□ -0.66
CMTM1-219ENST00000533953 LMO1P25800 156 aa10.95□□□□□ -0.66
CMTM1-219ENST00000533953 GABARAPL2P60520 117 aa10.95□□□□□ -0.66
CMTM1-219ENST00000533953 BAMBIQ13145 260 aa10.95□□□□□ -0.66
CMTM1-219ENST00000533953 ATXN7L3Q14CW9 347 aaPredicted RBP10.95□□□□□ -0.66
CMTM1-219ENST00000533953 HSD17B12Q53GQ0 312 aa10.95□□□□□ -0.66
CMTM1-219ENST00000533953 OR10K2Q6IF99 312 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms