RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 STPG1Q5TH74 334 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 RGS7BPQ6MZT1 257 aaPredicted RBP10.86□□□□□ -0.67
RAD50-209ENST00000533482 TMEM251Q8N6I4 163 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 TTTY12Q9BZ98 90 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 TINAGQ9UJW2 476 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 ABCA1O95477 2261 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 ZNF705GA8MUZ8 300 aaPredicted RBP10.86□□□□□ -0.67
RAD50-209ENST00000533482 H7C1Q1 480 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 LYPD3O95274 346 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 CALCRP30988 508 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 EFNB1P98172 346 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 LHX4Q969G2 390 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 MALSU1Q96EH3 234 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 NPAS1Q99742 590 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 OPA3Q9H6K4 179 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 NAA60Q9H7X0 242 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 C21orf140B9A014 251 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 CST4P01036 141 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 RFPL3SP0C7P2 107 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 PGA4P0DJD7 388 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 PGA3P0DJD8 388 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 KITLGP21583 273 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 ZP4Q12836 540 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 LYZL2Q7Z4W2 148 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 FAM58AQ8N1B3 248 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 C17orf78Q8N4C9 275 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 ASB13Q8WXK3 278 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 ZNF391Q9UJN7 358 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 PRELID3BQ9Y3B1 194 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 SPG11Q96JI7 2443 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 IGHV3-43A0A0B4J1X8 118 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 CDIPTO14735 213 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 SHOXO15266 292 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 TRAF3IP2O43734 574 aaPredicted RBP10.86□□□□□ -0.67
RAD50-209ENST00000533482 SFTA3P0C7M3 94 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 FTH1P19P0C7X4 201 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 IGHV3-43DP0DP04 118 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 COX6A1P12074 109 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 PJVKQ0ZLH3 352 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 SLC38A6Q8IZM9 456 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 RPUSD4Q96CM3 377 aaKnown RBP10.86□□□□□ -0.67
RAD50-209ENST00000533482 ZNF488Q96MN9 340 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 GPHA2Q96T91 129 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 ARV1Q9H2C2 271 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 FOXJ2Q9P0K8 574 aa10.86□□□□□ -0.67
RAD50-209ENST00000533482 B4E171 279 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 OR2C1O95371 312 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 SP1P08047 785 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 NMBP08949 121 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 TSPAN7P41732 249 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 KIAA0141Q14154 515 aaPredicted RBP10.85□□□□□ -0.67
RAD50-209ENST00000533482 ZNF260Q3ZCT1 412 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 OR5C1Q8NGR4 320 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 TMEM68Q96MH6 324 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 TMEM38BQ9NVV0 291 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 PSENENQ9NZ42 101 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 LINC00862A6NCI5 91 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 K7ESF4 209 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 F12P00748 615 aaPredicted RBP10.85□□□□□ -0.67
RAD50-209ENST00000533482 HMGN3Q15651 99 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 C4orf17Q53FE4 359 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 RBMS3Q6XE24 437 aaKnown RBP10.85□□□□□ -0.67
RAD50-209ENST00000533482 NECAP1Q8NC96 275 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 BVESQ8NE79 360 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 TRAF4Q9BUZ4 470 aaPredicted RBP10.85□□□□□ -0.67
RAD50-209ENST00000533482 TGIF2Q9GZN2 237 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 CHST5Q9GZS9 411 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 IGKV3D-11A0A0A0MRZ8 115 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 ZNF891A8MT65 544 aaPredicted RBP10.85□□□□□ -0.67
RAD50-209ENST00000533482 MT-CO2P00403 227 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 LINC00114Q6XXX2 140 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 OR2H1Q9GZK4 316 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 MSL2Q9HCI7 577 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 G6PC2Q9NQR9 355 aa10.85□□□□□ -0.67
RAD50-209ENST00000533482 C3orf85A0A1B0GTC6 90 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 EIF2S3P41091 472 aaKnown RBP10.84□□□□□ -0.67
RAD50-209ENST00000533482 TMEM267Q0VDI3 215 aaPredicted RBP10.84□□□□□ -0.67
RAD50-209ENST00000533482 GUK1Q16774 197 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.675e-6■■□□□ 13.4
RAD50-209ENST00000533482 USF3Q68DE3 2245 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 CLEC18AA5D8T8 446 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 TERTO14746 1132 aaKnown RBP10.84□□□□□ -0.67
RAD50-209ENST00000533482 RPP30P78346 268 aaKnown RBP10.84□□□□□ -0.67
RAD50-209ENST00000533482 COL19A1Q14993 1142 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 CBLN2Q8IUK8 224 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 CLEC18CQ8NCF0 446 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 CLRN3Q8NCR9 226 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 VOPP1Q96AW1 172 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 CLDN23Q96B33 292 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 GNPNAT1Q96EK6 184 aaPredicted RBP10.84□□□□□ -0.67
RAD50-209ENST00000533482 SF3B5Q9BWJ5 86 aaKnown RBP10.84□□□□□ -0.67
RAD50-209ENST00000533482 RAB9BQ9NP90 201 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 GAB2Q9UQC2 676 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 LRRC30A6NM36 301 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 DAOP14920 347 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 ZP1P60852 638 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 CISD2Q8N5K1 135 aaKnown RBP10.84□□□□□ -0.67
RAD50-209ENST00000533482 ZNF485Q8NCK3 441 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 WNT2BQ93097 391 aa10.84□□□□□ -0.67
RAD50-209ENST00000533482 ANGPTL4Q9BY76 406 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms