RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ZNF71Q9NQZ8 489 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-205ENST00000533464 TDRD6O60522 2096 aaKnown RBP15.43■□□□□ 0.06
PHRF1-205ENST00000533464 CNOT1A5YKK6 2376 aaKnown RBP15.43■□□□□ 0.06
PHRF1-205ENST00000533464 CDIPTO14735 213 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 ZP3P21754 424 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 COL19A1Q14993 1142 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 NCR3LG1Q68D85 454 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 TMEM108Q6UXF1 575 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 GPX7Q96SL4 187 aaPredicted RBP15.42■□□□□ 0.06
PHRF1-205ENST00000533464 NIT2Q9NQR4 276 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 NTMQ9P121 344 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 MRPS18BQ9Y676 258 aaKnown RBP15.42■□□□□ 0.06
PHRF1-205ENST00000533464 SPAARA0A1B0GVQ0 90 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 MED19A0JLT2 244 aaPredicted RBP15.42■□□□□ 0.06
PHRF1-205ENST00000533464 TO15178 435 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 SCMH1Q96GD3 660 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 ACY3Q96HD9 319 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 OR51I2Q9H344 312 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 GLRX2Q9NS18 164 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 IGHV3-13P01766 116 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 IGHV3-7P01780 117 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 CRHP06850 196 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 INHBBP09529 407 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 CSF2RBP32927 897 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 TMEM33P57088 247 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 FHL5Q5TD97 284 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 RPL7L1Q6DKI1 246 aaKnown RBP15.42■□□□□ 0.06
PHRF1-205ENST00000533464 KDF1Q8NAX2 398 aaPredicted RBP15.42■□□□□ 0.06
PHRF1-205ENST00000533464 CCL17Q92583 94 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 CLEC3BP05452 202 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 MPGP29372 298 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 POLR2GP62487 172 aaKnown RBP eCLIP15.42■□□□□ 0.06
PHRF1-205ENST00000533464 TNFAIP6P98066 277 aaPredicted RBP15.42■□□□□ 0.06
PHRF1-205ENST00000533464 MMP26Q9NRE1 261 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 V9GYS6 101 aa15.42■□□□□ 0.06
PHRF1-205ENST00000533464 UPK3AO75631 287 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 CD1AP06126 327 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 IL13RA2Q14627 380 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 C4orf17Q53FE4 359 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 HIKESHIQ53FT3 197 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 ZNF574Q6ZN55 896 aaPredicted RBP15.41■□□□□ 0.06
PHRF1-205ENST00000533464 DBX2Q6ZNG2 339 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 SLC25A42Q86VD7 318 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 COMMD1Q8N668 190 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 OR10AD1Q8NGE0 317 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 CYB5R1Q9UHQ9 305 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 ZNF107Q9UII5 783 aaPredicted RBP15.41■□□□□ 0.06
PHRF1-205ENST00000533464 TINAGQ9UJW2 476 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 STARD10Q9Y365 291 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 METTL15P1P0C7V9 234 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 ZNF17P17021 662 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 IGFBP7Q16270 282 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 C9orf62Q8N4C0 152 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 PHYHIPLQ96FC7 376 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 CXXC4Q9H2H0 198 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 A0A1W2PPC1 479 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 B4E171 279 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 PNPP00491 289 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 TSPAN7P41732 249 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 DVL1O14640 695 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 DVL1P1P54792 670 aaPredicted RBP15.41■□□□□ 0.06
PHRF1-205ENST00000533464 BPIFB3P59826 476 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 SLC38A11Q08AI6 406 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 PIGYQ3MUY2 71 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 BTNL8Q6UX41 500 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 MOB3BQ86TA1 216 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 ADIPOR1Q96A54 375 aa15.41■□□□□ 0.06
PHRF1-205ENST00000533464 HRASP01112 189 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 BCL3P20749 454 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 RPS4Y1P22090 263 aaKnown RBP15.4■□□□□ 0.06
PHRF1-205ENST00000533464 A0A1W2PPQ1 181 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 GNB2P62879 340 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 PGLYRP3Q96LB9 341 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 FAM96BQ9Y3D0 163 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 C20orf202A1L168 122 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 TRDCB7Z8K6 153 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 CSN1S1P47710 185 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 SLC26A1Q9H2B4 701 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 PLXNA1Q9UIW2 1896 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 CT45A10P0DMU9 189 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 GABRA1P14867 456 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 TBC1D26Q86UD7 250 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 GINS3Q9BRX5 216 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
PHRF1-205ENST00000533464 ST8SIA5O15466 376 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 IFI6P09912 130 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 CXorf58Q96LI9 332 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 MYOZ1Q9NP98 299 aaPredicted RBP15.4■□□□□ 0.06
PHRF1-205ENST00000533464 WSB1Q9Y6I7 421 aa15.4■□□□□ 0.06
PHRF1-205ENST00000533464 RGPD3A6NKT7 1758 aaPredicted RBP15.4■□□□□ 0.06
PHRF1-205ENST00000533464 PPYP01298 95 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 CD200R1LQ6Q8B3 271 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 MRPL22Q9NWU5 206 aaKnown RBP15.39■□□□□ 0.05
PHRF1-205ENST00000533464 AARDQ4LEZ3 155 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 FAM27BQ5VT28 67 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 HLA-DQB1P01920 261 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 LGALSLQ3ZCW2 172 aaPredicted RBP15.39■□□□□ 0.05
PHRF1-205ENST00000533464 TRAT1Q6PIZ9 186 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 CLEC9AQ6UXN8 241 aa15.39■□□□□ 0.05
PHRF1-205ENST00000533464 CLRN3Q8NCR9 226 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms