RNA–Protein interactions for RNA: ENST00000533252.1

CASP4-211, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 215 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-211ENST00000533252 TRAV27A0A087WT01 109 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 PPIAL4CA0A0B4J2A2 164 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 GGT3PA6NGU5 568 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 PPIAL4DF5H284 164 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 FBP2O00757 339 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 DCTN3O75935 186 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 BAG2O95816 211 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 IFNGP01579 166 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 IGHMP01871 453 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 IGFBP1P08833 259 aaPredicted RBP3.91□□□□□ -1.78
CASP4-211ENST00000533252 PPIAL4FP0DN26 164 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 PAICSP22234 425 aaKnown RBP3.91□□□□□ -1.78
CASP4-211ENST00000533252 CFL1P23528 166 aaKnown RBP3.91□□□□□ -1.78
CASP4-211ENST00000533252 PRDX6P30041 224 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 MDH1P40925 334 aaKnown RBP3.91□□□□□ -1.78
CASP4-211ENST00000533252 PITPNBP48739 271 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 PSME3P61289 254 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 GNB2P62879 340 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 HERV-K104P63124 156 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 LCN2P80188 198 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 CBX1P83916 185 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 KRTAP1-1Q07627 177 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 DGCR6Q14129 220 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 SELPLGQ14242 412 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 FREM1Q5H8C1 2179 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 SPATA46Q5T0L3 261 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 AVPI1Q5T686 147 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 ZNF774Q6NX45 483 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 SMARCD3Q6STE5 483 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 HACD2Q6Y1H2 254 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 WDR88Q6ZMY6 472 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 PGAP1Q75T13 922 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 MRPL21Q7Z2W9 205 aaKnown RBP3.91□□□□□ -1.78
CASP4-211ENST00000533252 CALHM3Q86XJ0 350 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 PHC2Q8IXK0 858 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 OFCC1Q8IZS5 231 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 OR8B3Q8NGG8 313 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 OR52J3Q8NH60 311 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 OR1F12Q8NHA8 337 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 PYURFQ96I23 114 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 POM121L2Q96KW2 1035 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 NSMCE2Q96MF7 247 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 OR8B2Q96RD0 313 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 ZNF426Q9BUY5 554 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 FAM107BQ9H098 131 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 HDHD2Q9H0R4 259 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 YY1AP1Q9H869 796 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 MED20Q9H944 212 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 FN3KRPQ9HA64 309 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 POLE4Q9NR33 117 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 TMEM106BQ9NUM4 274 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 ERVK-18Q9QC07 812 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 KLK11Q9UBX7 282 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 ATPIF1Q9UII2 106 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 PURGQ9UJV8 347 aaKnown RBP3.91□□□□□ -1.78
CASP4-211ENST00000533252 FOXA2Q9Y261 457 aaPredicted RBP3.91□□□□□ -1.78
CASP4-211ENST00000533252 CAB39Q9Y376 341 aaPredicted RBP3.91□□□□□ -1.78
CASP4-211ENST00000533252 STRAPQ9Y3F4 350 aaKnown RBP3.91□□□□□ -1.78
CASP4-211ENST00000533252 WIPI2Q9Y4P8 454 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 IER3IP1Q9Y5U9 82 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 ENPP4Q9Y6X5 453 aa3.91□□□□□ -1.78
CASP4-211ENST00000533252 AKAP9Q99996 3911 aa3.9□□□□□ -1.78
CASP4-211ENST00000533252 SONP18583 2426 aaKnown RBP3.9□□□□□ -1.78
CASP4-211ENST00000533252 A0A087WUU8 490 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 TRAV38-1A0A0B4J264 116 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 A0A1B0GUS0 222 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 BTBD17A6NE02 478 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 ANKRD30BLA7E2S9 258 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 F5H5K5 113 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 GMDSO60547 372 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 IGHV1-46P01743 117 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 FABP3P05413 133 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 CD55P08174 381 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 MMP7P09237 267 aaPredicted RBP3.9□□□□□ -1.79
CASP4-211ENST00000533252 RPS2P15880 293 aaKnown RBP3.9□□□□□ -1.79
CASP4-211ENST00000533252 H2AFXP16104 143 aaPredicted RBP3.9□□□□□ -1.79
CASP4-211ENST00000533252 KITLGP21583 273 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 HSD11B1P28845 292 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 FMO3P31513 532 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 GPR183P32249 361 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 DDOSTP39656 456 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 NAA10P41227 235 aaPredicted RBP3.9□□□□□ -1.79
CASP4-211ENST00000533252 GPR4P46093 362 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 GZMMP51124 257 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 CNN1P51911 297 aaKnown RBP3.9□□□□□ -1.79
CASP4-211ENST00000533252 ZNF133P52736 654 aaPredicted RBP3.9□□□□□ -1.79
CASP4-211ENST00000533252 HILS1P60008 231 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 ACTR3P61158 418 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 LMO4P61968 165 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 SPIBQ01892 262 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 PSG7Q13046 419 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 BAMBIQ13145 260 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 KRR1Q13601 381 aaKnown RBP3.9□□□□□ -1.79
CASP4-211ENST00000533252 OR8G1Q15617 311 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 RFX4Q33E94 735 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 TMEM155Q4W5P6 130 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 GPR157Q5UAW9 335 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 ETFRF1Q6IPR1 90 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 LEG1Q6P5S2 330 aa3.9□□□□□ -1.79
CASP4-211ENST00000533252 LRRC28Q86X40 367 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms