RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ZSCAN5BA6NJL1 495 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 VSTM5A8MXK1 200 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 MLNRO43193 412 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 NOS1APO75052 506 aaPredicted RBP15.68■□□□□ 0.1
SMPD1-208ENST00000533123 CD74P04233 296 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 AMY2AP04746 511 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 ARFRP1Q13795 201 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 ST8SIA4Q92187 359 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 IL36GQ9NZH8 169 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 IGHV3-64DA0A0J9YX35 117 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 PLSCR5A0PG75 271 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 LEUTXA8MZ59 168 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 GEMIN2O14893 280 aaKnown RBP15.68■□□□□ 0.1
SMPD1-208ENST00000533123 ZNF735P0CB33 412 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 ANXA7P20073 488 aaKnown RBP15.68■□□□□ 0.1
SMPD1-208ENST00000533123 APOBEC3AP31941 199 aaPredicted RBP15.68■□□□□ 0.1
SMPD1-208ENST00000533123 RAG2P55895 527 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 DAZAP2Q15038 168 aaPredicted RBP15.68■□□□□ 0.1
SMPD1-208ENST00000533123 PDCD1Q15116 288 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 RBMS2Q15434 407 aaKnown RBP15.68■□□□□ 0.1
SMPD1-208ENST00000533123 OR8G1Q15617 311 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 ESCO2Q56NI9 601 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 OSR2Q8N2R0 312 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 OR13G1Q8NGZ3 307 aa15.68■□□□□ 0.1
SMPD1-208ENST00000533123 DACT3Q96B18 629 aaPredicted RBP15.68■□□□□ 0.1
SMPD1-208ENST00000533123 A0A1W2PPR1 153 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 F8VVB4 439 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 F8VWA3 439 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 HRH1P35367 487 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 PNLIPRP3Q17RR3 467 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 OR5A2Q8NGI9 324 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 FBXW5Q969U6 566 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 SLC6A7Q99884 636 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 ZNF107Q9UII5 783 aaPredicted RBP15.67■□□□□ 0.1
SMPD1-208ENST00000533123 LOC105371267A0A1B0GV96 52 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 A6NNC1 897 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 BCL3P20749 454 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 BRICD5Q6PL45 260 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 BPIFB2Q8N4F0 458 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 OR2Z1Q8NG97 314 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 DHRS9Q9BPW9 319 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 SPOCK3Q9BQ16 436 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 OR51J1Q9H342 316 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMPD1-208ENST00000533123 PLEKHJ1Q9NW61 149 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 ZNF230Q9UIE0 474 aaPredicted RBP15.67■□□□□ 0.1
SMPD1-208ENST00000533123 ST3GAL6Q9Y274 331 aa15.67■□□□□ 0.1
SMPD1-208ENST00000533123 GCN1Q92616 2671 aaKnown RBP15.66■□□□□ 0.1
SMPD1-208ENST00000533123 DOPEY2Q9Y3R5 2298 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 F5H5P2 479 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 SYNGR1O43759 233 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 HPXP02790 462 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 HAGHLQ6PII5 290 aaPredicted RBP15.66■□□□□ 0.1
SMPD1-208ENST00000533123 IDO2Q6ZQW0 420 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 ZSCAN4Q8NAM6 433 aaPredicted RBP15.66■□□□□ 0.1
SMPD1-208ENST00000533123 MAFIPQ8WZ33 124 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 HDHD3Q9BSH5 251 aaPredicted RBP15.66■□□□□ 0.1
SMPD1-208ENST00000533123 AKAP6Q13023 2319 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 FABP7O15540 132 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 SPRY3O43610 288 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 PMP2P02689 132 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 SNU13P55769 128 aaKnown RBP15.66■□□□□ 0.1
SMPD1-208ENST00000533123 FCN2Q15485 313 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 SCGB2B2Q4G0G5 96 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 RNASE10Q5GAN6 216 aaKnown RBP15.66■□□□□ 0.1
SMPD1-208ENST00000533123 MICU1Q9BPX6 476 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 SEC22CQ9BRL7 303 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 FAAP24Q9BTP7 215 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 MTCH1Q9NZJ7 389 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 ANAPC10Q9UM13 185 aa15.66■□□□□ 0.1
SMPD1-208ENST00000533123 CACNA1DQ01668 2161 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 C3orf80F5H4A9 247 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 SHOXO15266 292 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 RBM11P57052 281 aaKnown RBP15.65■□□□□ 0.1
SMPD1-208ENST00000533123 WDR86Q86TI4 376 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 SLC38A6Q8IZM9 456 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 MUC15Q8N387 334 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 DYRK2Q92630 601 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 ST6GALNAC5Q9BVH7 336 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 RTL8AQ9BWD3 113 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 MED28Q9H204 178 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 CENPEQ02224 2701 aa15.65■□□□□ 0.1
SMPD1-208ENST00000533123 OR5B21A6NL26 309 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 SERPINE3A8MV23 424 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 RLN1P04808 185 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 ZNF81P51508 661 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 AP2S1P53680 142 aaPredicted RBP15.64■□□□□ 0.09
SMPD1-208ENST00000533123 GNG3P63215 75 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 MICBQ29980 383 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 MST1LQ2TV78 715 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 SP5Q6BEB4 398 aaPredicted RBP15.64■□□□□ 0.09
SMPD1-208ENST00000533123 ZCCHC24Q8N2G6 241 aaKnown RBP15.64■□□□□ 0.09
SMPD1-208ENST00000533123 ZNF488Q96MN9 340 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 SULT4A1Q9BR01 284 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 OCSTAMPQ9BR26 566 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 IL36RNQ9UBH0 155 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 ARFGEF3Q5TH69 2177 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 FASNP49327 2511 aaKnown RBP15.64■□□□□ 0.09
SMPD1-208ENST00000533123 A0A1B0GWJ7 208 aa15.64■□□□□ 0.09
SMPD1-208ENST00000533123 VSIG10L2P0DP72 767 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms