RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CD1AP06126 327 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 HSMCR30P0CW71 290 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 PSG2P11465 335 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 COX7A1P24310 79 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 GADD45AP24522 165 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 LMO1P25800 156 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 DCTDP32321 178 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 ENTPD1P49961 510 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 SPCS2Q15005 226 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 SSX1Q16384 188 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 TEX30Q5JUR7 227 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 LINC01590Q5TEZ4 76 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 CD200R1LQ6Q8B3 271 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 ZNF322Q6U7Q0 402 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-223ENST00000533079 KCTD20Q7Z5Y7 419 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 LHFPL4Q7Z7J7 247 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 SYS1Q8N2H4 156 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 ZNF561Q8N587 486 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 C11orf42Q8N5U0 333 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 OR51D1Q8NGF3 324 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 HAVCR2Q8TDQ0 301 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 SGK3Q96BR1 496 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 AKR1E2Q96JD6 320 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 OR10A2Q9H208 303 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 CENPMQ9NSP4 180 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 N6AMT1Q9Y5N5 214 aa9.98□□□□□ -0.81
CAPN1-223ENST00000533079 BIRC6Q9NR09 4857 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 RHBDL1O75783 438 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 CST4P01036 141 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 SPARCP09486 303 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 PSKH1P11801 424 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 ZNF182P17025 639 aaPredicted RBP9.97□□□□□ -0.81
CAPN1-223ENST00000533079 FGF9P31371 208 aaPredicted RBP9.97□□□□□ -0.81
CAPN1-223ENST00000533079 CAPZA1P52907 286 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 TAS2R43P59537 309 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 RPS7P62081 194 aaKnown RBP9.97□□□□□ -0.81
CAPN1-223ENST00000533079 BLCAPP62952 87 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 MRPL28Q13084 256 aaKnown RBP9.97□□□□□ -0.81
CAPN1-223ENST00000533079 PRDX4Q13162 271 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 TMEM95Q3KNT9 176 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 PLA1AQ53H76 456 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 ZNF626Q68DY1 528 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 PRSS45Q7RTY3 260 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 CENPVQ7Z7K6 275 aaPredicted RBP9.97□□□□□ -0.81
CAPN1-223ENST00000533079 LHFPL3Q86UP9 236 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 ZDHHC23Q8IYP9 409 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 DYNAPQ8N1N2 210 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 OR13D1Q8NGV5 346 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 DYNC2LI1Q8TCX1 351 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 UFD1Q92890 307 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 OTULINQ96BN8 352 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 CNN2Q99439 309 aaKnown RBP9.97□□□□□ -0.81
CAPN1-223ENST00000533079 RASL12Q9NYN1 266 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 STUB1Q9UNE7 303 aa9.97□□□□□ -0.81
CAPN1-223ENST00000533079 TRDV1A0A1B0GX56 115 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 TVP23AA6NH52 213 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 MTRF1O75570 445 aaKnown RBP9.96□□□□□ -0.82
CAPN1-223ENST00000533079 TFF1P04155 84 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 ARG1P05089 322 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 CLUP10909 449 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 SLC6A1P30531 599 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 PYCR1P32322 319 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 SERPINB10P48595 397 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 RAB13P51153 203 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 OR12D2P58182 307 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 ACTA2P62736 377 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 ACTG2P63267 376 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 DYNC1I2Q13409 638 aaKnown RBP9.96□□□□□ -0.82
CAPN1-223ENST00000533079 TRAM1Q15629 374 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 SSX2Q16385 188 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 SMIM21Q3B7S5 101 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 CCDC58Q4VC31 144 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 TCTEX1D4Q5JR98 221 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 OR2G6Q5TZ20 316 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 TMEM200BQ69YZ2 307 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 UNQ9370/PRO34162Q6UXP9 181 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 Q6ZS46 218 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 OR11H6Q8NGC7 330 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 HPSE2Q8WWQ2 592 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 ITFG2Q969R8 447 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 DCUN1D5Q9BTE7 237 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 ALG8Q9BVK2 526 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 NXF2Q9GZY0 626 aaKnown RBP9.96□□□□□ -0.82
CAPN1-223ENST00000533079 OR51E2Q9H255 320 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 PPP1R3EQ9H7J1 279 aa9.96□□□□□ -0.82
CAPN1-223ENST00000533079 DYNC2H1Q8NCM8 4307 aaKnown RBP9.95□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF850A8MQ14 1090 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 C17orf98A8MV24 154 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 OGG1O15527 345 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 RAMP3O60896 148 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 GPX5O75715 221 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 APOL3O95236 402 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF121P58317 390 aaPredicted RBP9.95□□□□□ -0.82
CAPN1-223ENST00000533079 VBP1P61758 197 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 NCS1P62166 190 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 GNG3P63215 75 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 DGCR2P98153 550 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF85Q03923 595 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 EIF2B1Q14232 305 aaKnown RBP9.95□□□□□ -0.82
CAPN1-223ENST00000533079 GFOD2Q3B7J2 385 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms