RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 Q8IYB0 196 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 NKAIN3Q8N8D7 197 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 PXT1Q8NFP0 134 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 GAFA1Q96PS6 74 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 GFI1Q99684 422 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 CHCHD6Q9BRQ6 235 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 RNF167Q9H6Y7 350 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 KAAG1Q9UBP8 84 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 CLN8Q9UBY8 286 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 ZNF222Q9UK12 451 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 SSR3Q9UNL2 185 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 GSTK1Q9Y2Q3 226 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 MAB21L2Q9Y586 359 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 A3GALT2U3KPV4 340 aa9.92□□□□□ -0.82
TRAF3IP2-212ENST00000532708 SONP18583 2426 aaKnown RBP9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 LOC100506127A0A0U1RQW1 187 aa9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 KIAA1324LA8MWY0 1029 aaPredicted RBP9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 CD5LO43866 347 aa9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 HTR3BO95264 441 aa9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 KNG1P01042 644 aa9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 PDCD1Q15116 288 aa9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 WDR25Q64LD2 544 aaPredicted RBP9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 ASCL4Q6XD76 172 aa9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 ASCC1Q8N9N2 400 aaKnown RBP9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 S100A13Q99584 98 aa9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 MMP26Q9NRE1 261 aa9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 YAE1D1Q9NRH1 226 aa9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 MRPS28Q9Y2Q9 187 aaKnown RBP9.91□□□□□ -0.82
TRAF3IP2-212ENST00000532708 LOC105371267A0A1B0GV96 52 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 A0A1W2PP11 408 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 SMIM30A4D0T7 59 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 NKX6-3A6NJ46 265 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 CRYZL1O95825 349 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 SERPINA2P20848 420 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 GALP22466 123 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 IL13RA1P78552 427 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 SLC22A6Q4U2R8 563 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 GLT8D1Q68CQ7 371 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 AWAT2Q6E213 333 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 METAP1DQ6UB28 335 aaPredicted RBP9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 GLIPR1L1Q6UWM5 242 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 CDH26Q8IXH8 852 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 ST8SIA4Q92187 359 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 YIPF6Q96EC8 236 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 METTL9Q9H1A3 318 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 HIF1ANQ9NWT6 349 aa9.9□□□□□ -0.82
TRAF3IP2-212ENST00000532708 SIGLEC5O15389 551 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 FOXH1O75593 365 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 TPPPO94811 219 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 MYL9P24844 172 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 FGF9P31371 208 aaPredicted RBP9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 OR10A3P58181 314 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 FGF12P61328 243 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 COL10A1Q03692 680 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 SCN1BQ07699 218 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 FAM166AQ6J272 317 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 TMEM185AQ8NFB2 350 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 TMEM186Q96B77 213 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 SDSLQ96GA7 329 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 UQCC2Q9BRT2 126 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 CENPOQ9BU64 300 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 DNTTIP1Q9H147 329 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 SLA2Q9H6Q3 261 aa9.9□□□□□ -0.83
TRAF3IP2-212ENST00000532708 HIVEP2P31629 2446 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 TRAV1-2A0A0B4J238 106 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 NDUFB3O43676 98 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 HAND1O96004 215 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 CSTBP04080 98 aaKnown RBP9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 TGFBR1P36897 503 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 MTNR1BP49286 362 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 CAPZA1P52907 286 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 ZNF146Q15072 292 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 PIGYQ3MUY2 71 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 LRRC10Q5BKY1 277 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 C1orf100Q5SVJ3 147 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 FIP1L1Q6UN15 594 aaKnown RBP9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 LYSMD2Q8IV50 215 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 DYNC2LI1Q8TCX1 351 aa9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 FOXRED1Q96CU9 486 aaPredicted RBP9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 C1orf147Q96MC9 270 aaPredicted RBP9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 SLC25A10Q9UBX3 287 aaPredicted RBP9.89□□□□□ -0.83
TRAF3IP2-212ENST00000532708 LOC105371242A0A075B767 164 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 A8MXK9 166 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 FAM25AB3EWG3 89 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 FAM25CB3EWG5 89 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 FAM25GB3EWG6 89 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 C22orf46C9J442 243 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 TRAPPC2P0DI81 140 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 TRAPPC2BP0DI82 140 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 NDUFB7P17568 137 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 CPT2P23786 658 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 NPY4RP50391 375 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 CLDN12P56749 244 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 LSM3P62310 102 aaKnown RBP9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 ELP2Q6IA86 826 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 FAHD2BQ6P2I3 314 aaPredicted RBP9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 BTN2A1Q7KYR7 527 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 GLCCI1Q86VQ1 547 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 ZNF561Q8N587 486 aa9.88□□□□□ -0.83
TRAF3IP2-212ENST00000532708 TMEM104Q8NE00 496 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms