RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 FAHD2AQ96GK7 314 aa18.47■□□□□ 0.55
LRRK1-208ENST00000532029 SNX22Q96L94 193 aa18.47■□□□□ 0.55
LRRK1-208ENST00000532029 C1orf147Q96MC9 270 aaPredicted RBP18.47■□□□□ 0.55
LRRK1-208ENST00000532029 NUDT16L1Q9BRJ7 211 aaKnown RBP18.47■□□□□ 0.55
LRRK1-208ENST00000532029 CENPOQ9BU64 300 aa18.47■□□□□ 0.55
LRRK1-208ENST00000532029 A0A1W2PP11 408 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 C22orf46C9J442 243 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 K7N7A8 449 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 ZNF737O75373 536 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 BPNT1O95861 308 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 RBM11P57052 281 aaKnown RBP18.46■□□□□ 0.55
LRRK1-208ENST00000532029 OR10A3P58181 314 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 NHLRC3Q5JS37 347 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 GPR141Q7Z602 305 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 CHST4Q8NCG5 386 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 OR5D13Q8NGL4 314 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 FUNDC2Q9BWH2 189 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 BANF2Q9H503 90 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 RNF167Q9H6Y7 350 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 RPUSD1Q9UJJ7 312 aaKnown RBP18.46■□□□□ 0.55
LRRK1-208ENST00000532029 INSIG2Q9Y5U4 225 aa18.46■□□□□ 0.55
LRRK1-208ENST00000532029 KIR2DS1A0A191URI9 304 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 TMEM82A0PJX8 343 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 J3QLI3 93 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 TFAP2AP05549 437 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 MGMTP16455 207 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 ALDH3B2P48448 385 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 PAX2Q02962 417 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 PDCD1Q15116 288 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 P2RY14Q15391 338 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 CR1LQ2VPA4 569 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 HES5Q5TA89 166 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 Q6P435 159 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 GDPD3Q7L5L3 318 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 LINC00596Q86U02 117 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 OR8H2Q8N162 312 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 DCTN5Q9BTE1 182 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 MRI1Q9BV20 369 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 SCOCQ9UIL1 159 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 ABCA1O95477 2261 aa18.45■□□□□ 0.54
LRRK1-208ENST00000532029 SMIM30A4D0T7 59 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 OR7C1O76099 320 aaPredicted RBP18.44■□□□□ 0.54
LRRK1-208ENST00000532029 MPIG6BO95866 241 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 LIPFP07098 398 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 ARSBP15848 533 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 SDC2P34741 201 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 LSM3P62310 102 aaKnown RBP18.44■□□□□ 0.54
LRRK1-208ENST00000532029 GRK1Q15835 563 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 MPV17LQ2QL34 196 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 C17orf107Q6ZR85 190 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 TMEM104Q8NE00 496 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 KCNG3Q8TAE7 436 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 FAM46BQ96A09 425 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 SLC25A28Q96A46 364 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 SELENOIQ9C0D9 397 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 CHST6Q9GZX3 395 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 C7orf69Q9H7B7 122 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 TMEM160Q9NX00 188 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 STEAP1Q9UHE8 339 aa18.44■□□□□ 0.54
LRRK1-208ENST00000532029 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.43■□□□□ 0.54
LRRK1-208ENST00000532029 TRBV23-1A0A0A0MS06 115 aa18.43■□□□□ 0.54
LRRK1-208ENST00000532029 IFITM5A6NNB3 132 aa18.43■□□□□ 0.54
LRRK1-208ENST00000532029 NOTOA8MTQ0 251 aa18.43■□□□□ 0.54
LRRK1-208ENST00000532029 GEMIN2O14893 280 aaKnown RBP18.43■□□□□ 0.54
LRRK1-208ENST00000532029 PPIAL4GP0DN37 164 aa18.43■□□□□ 0.54
LRRK1-208ENST00000532029 VSIG8P0DPA2 414 aa18.43■□□□□ 0.54
LRRK1-208ENST00000532029 HNF1AP20823 631 aa18.43■□□□□ 0.54
LRRK1-208ENST00000532029 LMO1P25800 156 aa18.43■□□□□ 0.54
LRRK1-208ENST00000532029 CLDN12P56749 244 aa18.43■□□□□ 0.54
LRRK1-208ENST00000532029 MXD1Q05195 221 aa18.43■□□□□ 0.54
LRRK1-208ENST00000532029 OR51D1Q8NGF3 324 aa18.43■□□□□ 0.54
LRRK1-208ENST00000532029 DACT3Q96B18 629 aaPredicted RBP18.43■□□□□ 0.54
LRRK1-208ENST00000532029 CSPG4Q6UVK1 2322 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 A0A0G2JK05 382 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 A0A1W2PQ09 198 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 SLC33A1O00400 549 aaPredicted RBP18.42■□□□□ 0.54
LRRK1-208ENST00000532029 MGST3O14880 152 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 PSPNO60542 156 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 RPL5P46777 297 aaKnown RBP18.42■□□□□ 0.54
LRRK1-208ENST00000532029 OR3A1P47881 315 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 EDDM3BP56851 147 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 EDDM3AQ14507 147 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 TAF9Q16594 264 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 PAN3Q58A45 887 aaKnown RBP18.42■□□□□ 0.54
LRRK1-208ENST00000532029 OR10K2Q6IF99 312 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 OR2W3Q7Z3T1 314 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 FAM185AQ8N0U4 392 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 OR4S1Q8NGB4 309 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 C8orf46Q8TAG6 207 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 FAM3DQ96BQ1 224 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 TMEM59Q9BXS4 323 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 TMPRSS13Q9BYE2 586 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 SHARPINQ9H0F6 387 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 PPA2Q9H2U2 334 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 MALRD1Q5VYJ5 2156 aa18.42■□□□□ 0.54
LRRK1-208ENST00000532029 FAM90A10PA6NDY2 464 aa18.41■□□□□ 0.54
LRRK1-208ENST00000532029 FAM90A18PA6NE21 464 aa18.41■□□□□ 0.54
LRRK1-208ENST00000532029 FAM90A16PA6NEW6 464 aa18.41■□□□□ 0.54
LRRK1-208ENST00000532029 FAM90A20PA6NIJ5 464 aa18.41■□□□□ 0.54
LRRK1-208ENST00000532029 FAM90A8PA6NJQ4 464 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms