RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ACP7Q6ZNF0 438 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF497Q6ZNH5 498 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 C6orf120Q7Z4R8 191 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 TMED4Q7Z7H5 227 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 NR2C2APQ86WQ0 139 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 DRAM1Q8N682 238 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 CLDN22Q8N7P3 220 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 OR2D3Q8NGH3 330 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 JOSD2Q8TAC2 188 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 ORAOV1Q8WV07 137 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 EEF1AKMT1Q8WVE0 214 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 RDH5Q92781 318 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 TAMM41Q96BW9 452 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 PPP1R36Q96LQ0 422 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 OR2M2Q96R28 347 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 OR4K3Q96R72 315 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 ULBP1Q9BZM6 244 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 SLC25A31Q9H0C2 315 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 PARP11Q9NR21 331 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 MMP26Q9NRE1 261 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 FBXO5Q9UKT4 447 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 FARSAQ9Y285 508 aaKnown RBP3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 INSIG2Q9Y5U4 225 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 CLUHO75153 1309 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 ANKRD30AQ9BXX3 1397 aa3.11□□□□□ -1.91
AC055878.1-201ENST00000531858 ZFYVE9O95405 1425 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 DENND4AQ7Z401 1863 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 IGKV1-27A0A075B6S5 117 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 KRBOX1C9JBD0 128 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 D6RAR5 112 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 MFNGO00587 321 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 HAND1O96004 215 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 IL3P08700 152 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 SLC6A1P30531 599 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 PMELP40967 661 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 NMUP48645 174 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 TCL1AP56279 114 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 SMAGPQ0VAQ4 97 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 RBMY1FQ15415 496 aaKnown RBP3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 TMEM42Q69YG0 159 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF774Q6NX45 483 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 SCGB1D4Q6XE38 83 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 C20orf203Q8NBC4 194 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 OR1J4Q8NGS1 313 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 OR5K1Q8NHB7 308 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 TEX47Q8TBZ9 253 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 ASB17Q8WXJ9 295 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 DCUN1D4Q92564 292 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 CLDN23Q96B33 292 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF689Q96CS4 500 aaPredicted RBP3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 NIPSNAP1Q9BPW8 284 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 TIPINQ9BVW5 301 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF717Q9BY31 904 aaPredicted RBP3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 PARVAQ9NVD7 372 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 GLTPQ9NZD2 209 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 ZNF223Q9UK11 482 aaPredicted RBP3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 ALG5Q9Y673 324 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 ENPP4Q9Y6X5 453 aa3.1□□□□□ -1.91
AC055878.1-201ENST00000531858 IGLV11-55A0A075B6I3 123 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 CENPVL3A0A0U1RRI6 287 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 SMIM9A6NGZ8 99 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 KLLNB2CW77 178 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 K7EPK0 472 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 M0R1X1 148 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 FFAR1O14842 300 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 TCF21O43680 179 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 FOXH1O75593 365 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 EPPINO95925 133 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 CCR7P32248 378 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 RAB25P57735 213 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 ARPC4P59998 168 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 NAA20P61599 178 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 PPP1R1AQ13522 171 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 KRR1Q13601 381 aaKnown RBP3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 BATFQ16520 125 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 C15orf32Q32M92 178 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 KRTAP24-1Q3LI83 254 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 LINC00303Q3SY05 128 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 TMEM97Q5BJF2 176 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 GLYATQ6IB77 296 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 DNAJC24Q6P3W2 148 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 GUSBP11Q6P575 273 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 RASSF6Q6ZTQ3 369 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 GALNT10Q86SR1 603 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 SLC51BQ86UW2 128 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 C1orf158Q8N1D5 194 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 OR2M7Q8NG81 312 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 OR4M2Q8NGB6 313 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 OR10D3Q8NH80 312 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 OR1L1Q8NH94 360 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 RHOXF1Q8NHV9 184 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 TMBIM1Q969X1 311 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 RAD51AP1Q96B01 352 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 TM4SF18Q96CE8 201 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 NEURL3Q96EH8 262 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 C16orf74Q96GX8 76 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 FMC1Q96HJ9 113 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 FAM210BQ96KR6 192 aa3.09□□□□□ -1.91
AC055878.1-201ENST00000531858 CEP19Q96LK0 163 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms