RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 C17orf50Q8WW18 174 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 OR2A7Q96R45 310 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 POTEKPQ9BYX7 375 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 SLC25A31Q9H0C2 315 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 ZNF430Q9H8G1 570 aaPredicted RBP2.76□□□□□ -1.97
USP47-211ENST00000531513 RHOFQ9HBH0 211 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 PLEKHJ1Q9NW61 149 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 C21orf62Q9NYP8 219 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 RBM12B-AS1Q9P1G2 102 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 ARHGAP21Q5T5U3 1957 aa2.76□□□□□ -1.97
USP47-211ENST00000531513 RAB3GAP2Q9H2M9 1393 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 MYO15BQ96JP2 1530 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 FAM183AA6NL82 134 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 EFCAB9A8MZ26 197 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 F5H5K5 113 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 GPR171O14626 319 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 PSIP1O75475 530 aaKnown RBP2.75□□□□□ -1.97
USP47-211ENST00000531513 ATP6V1G2O95670 118 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 CCNE2O96020 404 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 HLA-AP01891 365 aaKnown RBP2.75□□□□□ -1.97
USP47-211ENST00000531513 MAS1P04201 325 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 SNRPAP09012 282 aaKnown RBP2.75□□□□□ -1.97
USP47-211ENST00000531513 CISD3P0C7P0 127 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 CECR9P0C854 216 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 NELFEP18615 380 aaKnown RBP2.75□□□□□ -1.97
USP47-211ENST00000531513 HLA-DMAP28067 261 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 COILP38432 576 aaPredicted RBP2.75□□□□□ -1.97
USP47-211ENST00000531513 CDC34P49427 236 aaPredicted RBP2.75□□□□□ -1.97
USP47-211ENST00000531513 MEF2CQ06413 473 aaPredicted RBP2.75□□□□□ -1.97
USP47-211ENST00000531513 SSX1Q16384 188 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 UBE2NLQ5JXB2 153 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 FAM162BQ5T6X4 162 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 DRAM2Q6UX65 266 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 GALNT10Q86SR1 603 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 UBALD2Q8IYN6 164 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 YIPF6Q96EC8 236 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 FOPNLQ96NB1 174 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 GPR22Q99680 433 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 SPZ1Q9BXG8 430 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 UGT2B28Q9BY64 529 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 SLC19A3Q9BZV2 496 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 METTL17Q9H7H0 456 aaPredicted RBP2.75□□□□□ -1.97
USP47-211ENST00000531513 TAS2R5Q9NYW4 299 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 CBY1Q9Y3M2 126 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 YTHDF2Q9Y5A9 579 aaKnown RBP2.75□□□□□ -1.97
USP47-211ENST00000531513 ZNF780BQ9Y6R6 833 aa2.75□□□□□ -1.97
USP47-211ENST00000531513 COL4A4P53420 1690 aaPredicted RBP2.75□□□□□ -1.97
USP47-211ENST00000531513 SETD1AO15047 1707 aaKnown RBP2.74□□□□□ -1.97
USP47-211ENST00000531513 TRAV8-2A0A0B4J237 113 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 MYBPHLA2RUH7 354 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 CD300LBA8K4G0 201 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 A8MWL6 223 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 GYG2O15488 501 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 ATP8B1O43520 1251 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 SLC37A4O43826 429 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 COX7A2P2O60397 106 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 HPGDSO60760 199 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 CNMDO75829 334 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 CCNKO75909 580 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 AHSA1O95433 338 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 CYB5R3P00387 301 aaPredicted RBP2.74□□□□□ -1.97
USP47-211ENST00000531513 CA2P00918 260 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 LINC00869P0C866 280 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 SPNP16150 400 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 HIST1H1CP16403 213 aaKnown RBP2.74□□□□□ -1.97
USP47-211ENST00000531513 ATF1P18846 271 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 F8A1P23610 371 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 PRTN3P24158 256 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 MAGEA2P43356 314 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 MYL6P60660 151 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 CTAG1AP78358 180 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 MRPS15P82914 257 aaKnown RBP2.74□□□□□ -1.97
USP47-211ENST00000531513 ELOCQ15369 112 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 GLYATQ6IB77 296 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 DGAT2L6Q6ZPD8 337 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 LINC00596Q86U02 117 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 PDPNQ86YL7 162 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 SLC13A5Q86YT5 568 aaPredicted RBP2.74□□□□□ -1.97
USP47-211ENST00000531513 ITPRIPQ8IWB1 547 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 BLIDQ8IZY5 108 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 TMEM251Q8N6I4 163 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 Q8N9L7 120 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 ZNF555Q8NEP9 628 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 OR9A2Q8NGT5 310 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 OR6K3Q8NGY3 331 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 L3HYPDHQ96EM0 354 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 LINC00167Q96N53 147 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 DERL3Q96Q80 235 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 RNF5Q99942 180 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 SND1-IT1Q9HBX3 110 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 USE1Q9NZ43 259 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 RFNGQ9Y644 331 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 MAP3K5Q99683 1374 aa2.74□□□□□ -1.97
USP47-211ENST00000531513 TSPOAP1O95153 1857 aa2.73□□□□□ -1.97
USP47-211ENST00000531513 TRAV8-3A0A0A6YYJ7 113 aa2.73□□□□□ -1.97
USP47-211ENST00000531513 IGHV1-3A0A0C4DH29 117 aa2.73□□□□□ -1.97
USP47-211ENST00000531513 C9JQL5 133 aa2.73□□□□□ -1.97
USP47-211ENST00000531513 H3BP45 60 aa2.73□□□□□ -1.97
USP47-211ENST00000531513 MED6O75586 246 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms