RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CAPSLQ8WWF8 208 aa14.69□□□□□ -0.06
SSSCA1-206ENST00000531405 ADAT3Q96EY9 351 aaPredicted RBP14.69□□□□□ -0.06
SSSCA1-206ENST00000531405 AKR1E2Q96JD6 320 aa14.69□□□□□ -0.06
SSSCA1-206ENST00000531405 SEBOXQ9HB31 216 aaPredicted RBP14.69□□□□□ -0.06
SSSCA1-206ENST00000531405 WARS2Q9UGM6 360 aaKnown RBP14.69□□□□□ -0.06
SSSCA1-206ENST00000531405 OR2T7P0C7T2 308 aa14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 ERP29P30040 261 aaKnown RBP14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 HOXD3P31249 432 aaPredicted RBP14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 BRS3P32247 399 aa14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 MTCP1P56278 107 aa14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 BDH1Q02338 343 aa14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 DEFB121Q5J5C9 76 aa14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 OR4X2Q8NGF9 303 aa14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 RFT1Q96AA3 541 aa14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 RBM14Q96PK6 669 aaKnown RBP14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 ZNF286AQ9HBT8 521 aa14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 INPP5EQ9NRR6 644 aa14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 GSTK1Q9Y2Q3 226 aa14.68□□□□□ -0.06
SSSCA1-206ENST00000531405 G3V2T6 193 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 SULT1C4O75897 302 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 OR2F2O95006 317 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 OR2H2O95918 312 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 CYB5AP00167 134 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 IGLV1-47P01700 117 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 HTR1FP30939 366 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 GLIPR1P48060 266 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 AESQ08117 197 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 DNAL1Q4LDG9 190 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 TP53I3Q53FA7 332 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 C9orf152Q5JTZ5 239 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 SPIN3Q5JUX0 258 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 UTF1Q5T230 341 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 KDM4DQ6B0I6 523 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 HEPN1Q6WQI6 88 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 RNF144BQ7Z419 303 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 DNAAF1Q8NEP3 725 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 ZNF596Q8TC21 504 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 PP6455Q8WZ26 134 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 RNF166Q96A37 237 aaPredicted RBP14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 RCC1LQ96I51 464 aaKnown RBP14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 GAL3ST2Q9H3Q3 398 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 HMG20AQ9NP66 347 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 ING3Q9NXR8 418 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 GNG8Q9UK08 70 aa14.67□□□□□ -0.06
SSSCA1-206ENST00000531405 TRGV10A0A0A0MS01 117 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 IGKV1-12A0A0C4DH73 117 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 LEUTXA8MZ59 168 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 IGKV1D-12P01611 117 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 UBCP0CG48 685 aaKnown RBP14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 ATF1P18846 271 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 POLR2IP36954 125 aaKnown RBP14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 ZNF85Q03923 595 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 OR52W1Q6IF63 320 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 RTN4RL2Q86UN3 420 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 CCDC54Q8NEL0 328 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 FGGYQ96C11 551 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 SLC7A6OSQ96CW6 309 aaPredicted RBP14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 C10orf35Q96D05 121 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 SPACA5Q96QH8 159 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 EXOSC4Q9NPD3 245 aaKnown RBP14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 GLS2Q9UI32 602 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 HHLA2Q9UM44 414 aa14.66□□□□□ -0.06
SSSCA1-206ENST00000531405 SH2D1BO14796 132 aa14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 ISL1P61371 349 aa14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 SCN1BQ07699 218 aa14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 PDZK1IP1Q13113 114 aa14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 RBM39Q14498 530 aaKnown RBP14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 KPNB1Q14974 876 aaKnown RBP14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 ATP6AP1Q15904 470 aa14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 TPTE2P1Q5T6R2 138 aa14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 LINC00482Q8N8I6 264 aa14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 OR5D18Q8NGL1 313 aa14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 CORO2AQ92828 525 aa14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 CIB1Q99828 191 aa14.65□□□□□ -0.06
SSSCA1-206ENST00000531405 BUB1B-PAK6H3BSN5 160 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 ZNF20P17024 532 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 CD34P28906 385 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 ATP6V1E1P36543 226 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 OR3A4PP47883 348 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 ARHGDIBP52566 201 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 CDC42P60953 191 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 HLA-DRB5Q30154 266 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 LHFPL2Q6ZUX7 228 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 FAM220AQ7Z4H9 259 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 COQ2Q96H96 371 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 OPALINQ96PE5 141 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 GABARAPL1Q9H0R8 117 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 TAS2R3Q9NYW6 316 aa14.64□□□□□ -0.07
SSSCA1-206ENST00000531405 ODAMA1E959 279 aa14.63□□□□□ -0.07
SSSCA1-206ENST00000531405 LY6LH3BQJ8 138 aa14.63□□□□□ -0.07
SSSCA1-206ENST00000531405 TOR1AO14656 332 aa14.63□□□□□ -0.07
SSSCA1-206ENST00000531405 DUS4LO95620 317 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-206ENST00000531405 CLIC3O95833 236 aa14.63□□□□□ -0.07
SSSCA1-206ENST00000531405 VSIG8P0DPA2 414 aa14.63□□□□□ -0.07
SSSCA1-206ENST00000531405 ZNF44P15621 663 aa14.63□□□□□ -0.07
SSSCA1-206ENST00000531405 PRKACBP22694 351 aa14.63□□□□□ -0.07
SSSCA1-206ENST00000531405 CEACAM3P40198 252 aa14.63□□□□□ -0.07
SSSCA1-206ENST00000531405 PTGFRP43088 359 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms