RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 DCAF12L2Q5VW00 463 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 ZNF660Q6AZW8 331 aaPredicted RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 THOC7Q6I9Y2 204 aaKnown RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 INO80CQ6PI98 192 aaPredicted RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 FBXW12Q6X9E4 464 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 MOB3CQ70IA8 216 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 MOB1BQ7L9L4 216 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 P4HA3Q7Z4N8 544 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 SGPP2Q8IWX5 399 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 SLC38A6Q8IZM9 456 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 FBXL14Q8N1E6 418 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 C17orf78Q8N4C9 275 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 EIF4E3Q8N5X7 224 aaKnown RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 ZNF611Q8N823 705 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 FAM169BQ8N8A8 192 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 LRTM2Q8N967 370 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 CCDC71LQ8N9Z2 235 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 CPEB3Q8NE35 698 aaKnown RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 OR56B2PQ8NGI1 322 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 OR5D18Q8NGL1 313 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 OR5M9Q8NGP3 310 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 OR13G1Q8NGZ3 307 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 PPP1R1CQ8WVI7 109 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 PIGCQ92535 297 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 BCL2L2Q92843 193 aaPredicted RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 SARAFQ96BY9 339 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 GALNT14Q96FL9 552 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 C2orf50Q96LR7 162 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 SLX1AQ9BQ83 275 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 ST6GALNAC5Q9BVH7 336 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 PAPOLGQ9BWT3 736 aaKnown RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 SUCNR1Q9BXA5 334 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 HES7Q9BYE0 225 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 SLC25A32Q9H2D1 315 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 C5orf66Q9H5L9 145 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 CHMP1AQ9HD42 196 aaPredicted RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 ZNF701Q9NV72 531 aaPredicted RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 RCC2Q9P258 522 aaKnown RBP4.78□□□□□ -1.64
PCF11-205ENST00000530906 CLCF1Q9UBD9 225 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 ST3GAL6Q9Y274 331 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 EYSQ5T1H1 3165 aa4.78□□□□□ -1.64
PCF11-205ENST00000530906 GPR179Q6PRD1 2367 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 TRAV14DV4A0A0A6YYC5 116 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 TEX13DA0A0J9YY54 714 aaPredicted RBP4.77□□□□□ -1.65
PCF11-205ENST00000530906 DUXBA0A1W2PPF3 345 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 LRP5LA4QPB2 252 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 RNF222A6NCQ9 220 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 C5orf51A6NDU8 294 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 CRYM-AS1A6NIL9 109 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 CD300LBA8K4G0 201 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 ZNF850A8MQ14 1090 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 LEUTXA8MZ59 168 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 AHRRA9YTQ3 701 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 TRAPPC2LH3BP13 241 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 J3QT63 122 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 TAAR5O14804 337 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 SIX6O95475 246 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 F10P00742 488 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 IFNA21P01568 189 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 HLA-HP01893 362 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 PATE4P0C8F1 98 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 ZNF728P0DKX0 622 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 CD79AP11912 226 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 PGAM2P15259 253 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 RPS2P15880 293 aaKnown RBP4.77□□□□□ -1.65
PCF11-205ENST00000530906 GABRR1P24046 479 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 S100GP29377 79 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 SSTR2P30874 369 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 HOXC12P31275 282 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 PTGER4P35408 488 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 MDH2P40926 338 aaKnown RBP4.77□□□□□ -1.65
PCF11-205ENST00000530906 RFC3P40938 356 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 NPY4RP50391 375 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 UBE2NP61088 152 aaKnown RBP4.77□□□□□ -1.65
PCF11-205ENST00000530906 RND3P61587 244 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 SUPT4H1P63272 117 aaKnown RBP4.77□□□□□ -1.65
PCF11-205ENST00000530906 BAMBIQ13145 260 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 RTP5Q14D33 572 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 GUSBP1Q15486 140 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 TAF9Q16594 264 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 SHEQ5VZ18 495 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 SIGIRRQ6IA17 410 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 EIF5AL1Q6IS14 154 aaKnown RBP4.77□□□□□ -1.65
PCF11-205ENST00000530906 PRSS54Q6PEW0 395 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 IGFL3Q6UXB1 125 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 CLEC18BQ6UXF7 455 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 TFAP2EQ6VUC0 442 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 Q6ZT83 130 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 SLC25A26Q70HW3 274 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 KCTD9Q7L273 389 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 RNF144BQ7Z419 303 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 C6orf201Q7Z4U5 140 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 CCDC28AQ8IWP9 274 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 PDZD9Q8IXQ8 264 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 DEFB124Q8NES8 71 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 SLC30A7Q8NEW0 376 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 OR10AD1Q8NGE0 317 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 OR10K1Q8NGX5 313 aa4.77□□□□□ -1.65
PCF11-205ENST00000530906 FGFBP3Q8TAT2 258 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms