RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 OR8G1Q15617 311 aa12.36□□□□□ -0.43
USP48-213ENST00000529637 CRIP3Q6Q6R5 217 aa12.36□□□□□ -0.43
USP48-213ENST00000529637 SPEM1Q8N4L4 309 aa12.36□□□□□ -0.43
USP48-213ENST00000529637 SPACA9Q96E40 222 aaPredicted RBP12.36□□□□□ -0.43
USP48-213ENST00000529637 SNX22Q96L94 193 aa12.36□□□□□ -0.43
USP48-213ENST00000529637 RBM24Q9BX46 236 aaKnown RBP12.36□□□□□ -0.43
USP48-213ENST00000529637 PECRQ9BY49 303 aa12.36□□□□□ -0.43
USP48-213ENST00000529637 MRPL13Q9BYD1 178 aaKnown RBP12.36□□□□□ -0.43
USP48-213ENST00000529637 C19orf25Q9UFG5 118 aaPredicted RBP12.36□□□□□ -0.43
USP48-213ENST00000529637 KCNIP3Q9Y2W7 256 aa12.36□□□□□ -0.43
USP48-213ENST00000529637 TCAPO15273 167 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 GPR137BO60478 399 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 OMGP23515 440 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 ZNF160Q9HCG1 818 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 FOXD3Q9UJU5 478 aaPredicted RBP12.35□□□□□ -0.43
USP48-213ENST00000529637 APLNRP35414 380 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 CHAF1BQ13112 559 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 P4HA3Q7Z4N8 544 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 DTX1Q86Y01 620 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 OR2M3Q8NG83 312 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 RNASE11Q8TAA1 199 aaKnown RBP12.35□□□□□ -0.43
USP48-213ENST00000529637 DNASE2BQ8WZ79 361 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 C2orf88Q9BSF0 95 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 BCO1Q9HAY6 547 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 STRAPQ9Y3F4 350 aaKnown RBP12.35□□□□□ -0.43
USP48-213ENST00000529637 TMED3Q9Y3Q3 217 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 IGHV5-10-1A0A0J9YXX1 117 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 PTBP3O95758 552 aaKnown RBP12.35□□□□□ -0.43
USP48-213ENST00000529637 DBHP09172 617 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 OR2G3Q8NGZ4 309 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 OXGR1Q96P68 337 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 URM1Q9BTM9 101 aaKnown RBP12.35□□□□□ -0.43
USP48-213ENST00000529637 FAM86C1Q9NVL1 165 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 OCIAD1Q9NX40 245 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 PADI1Q9ULC6 663 aa12.35□□□□□ -0.43
USP48-213ENST00000529637 IGLV3-12A0A075B6K2 115 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 NSG1A0A0A6YYJ2 146 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 NPIPB13A6NJU9 1138 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 NPIPB4C9JG80 1138 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 TP53I11O14683 189 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 CFIP05156 583 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 CSNK1A1P48729 337 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 PHLDA2Q53GA4 152 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 ZNF664Q8N3J9 261 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 SLC25A31Q9H0C2 315 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 ZNF700Q9H0M5 742 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 SEMA5BQ9P283 1151 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 A0A1W2PNV4 684 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 FAM24AA6NFZ4 105 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 FOXI3A8MTJ6 420 aaPredicted RBP12.34□□□□□ -0.43
USP48-213ENST00000529637 STMND1H3BQB6 276 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 GEMIN2O14893 280 aaKnown RBP12.34□□□□□ -0.43
USP48-213ENST00000529637 ATP6V0CP27449 155 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 PRSS12P56730 875 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 FAM89BQ8N5H3 189 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 PIGTQ969N2 578 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 UNKLQ9H9P5 680 aaKnown RBP12.34□□□□□ -0.43
USP48-213ENST00000529637 NXT1Q9UKK6 140 aaKnown RBP12.34□□□□□ -0.43
USP48-213ENST00000529637 B3GALT1Q9Y5Z6 326 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 EML6Q6ZMW3 1958 aa12.34□□□□□ -0.43
USP48-213ENST00000529637 SLC33A1O00400 549 aaPredicted RBP12.33□□□□□ -0.43
USP48-213ENST00000529637 FAHP16930 419 aa12.33□□□□□ -0.43
USP48-213ENST00000529637 GABRR1P24046 479 aa12.33□□□□□ -0.43
USP48-213ENST00000529637 OPRM1P35372 400 aa12.33□□□□□ -0.43
USP48-213ENST00000529637 FXYD4P59646 89 aa12.33□□□□□ -0.43
USP48-213ENST00000529637 ICAM4Q14773 271 aa12.33□□□□□ -0.43
USP48-213ENST00000529637 SHBQ15464 509 aa12.33□□□□□ -0.43
USP48-213ENST00000529637 AKR1C8PQ5T2L2 129 aa12.33□□□□□ -0.43
USP48-213ENST00000529637 DPPA2Q7Z7J5 298 aa12.33□□□□□ -0.43
USP48-213ENST00000529637 MOB1AQ9H8S9 216 aa12.33□□□□□ -0.43
USP48-213ENST00000529637 A8MWP6 167 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 NPIPA2E9PIF3 369 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 NPIPA3F8WFD2 350 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 EREGO14944 169 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 CTSDP07339 412 aaPredicted RBP12.33□□□□□ -0.44
USP48-213ENST00000529637 PAX1P15863 534 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 G0S2P27469 103 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 PTGDSP41222 190 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 GLIPR1P48060 266 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 TMEM187Q14656 261 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 OR5L1Q8NGL2 311 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 OR6X1Q8NH79 312 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 CEP192Q8TEP8 1941 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 A0A1B0GW64 132 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 TMEM225BP0DP42 221 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 FUT3P21217 361 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 LYSMD4Q5XG99 296 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 FBXW12Q6X9E4 464 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 SUMF1Q8NBK3 374 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 OR11L1Q8NGX0 322 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 TMEM171Q8WVE6 324 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 FAM210BQ96KR6 192 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 PLEK2Q9NYT0 353 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 AK3Q9UIJ7 227 aa12.33□□□□□ -0.44
USP48-213ENST00000529637 PTRH2Q9Y3E5 179 aaKnown RBP12.33□□□□□ -0.44
USP48-213ENST00000529637 A0A087WWC5 75 aa12.32□□□□□ -0.44
USP48-213ENST00000529637 A0A087WZY1 265 aa12.32□□□□□ -0.44
USP48-213ENST00000529637 CCDC163A0A0D9SF12 145 aa12.32□□□□□ -0.44
USP48-213ENST00000529637 GZMBP10144 247 aa12.32□□□□□ -0.44
USP48-213ENST00000529637 FCGR2AP12318 317 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms