RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 C4orf36Q96KX1 117 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 CDCA4Q9BXL8 241 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 NEK6Q9HC98 313 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 S100A14Q9HCY8 104 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 INPP5EQ9NRR6 644 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 GLS2Q9UI32 602 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 TBL2Q9Y4P3 447 aaKnown RBP8.49□□□□□ -1.05
CPSF1-203ENST00000527916 RYR2Q92736 4967 aa8.49□□□□□ -1.05
CPSF1-203ENST00000527916 LOC100130705A0A1B0GUX0 176 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 hADV38S2A0JD32 116 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 TMEM82A0PJX8 343 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 OR4C45A6NMZ5 311 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 H3BSH0 61 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 J3QLW9 94 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 FADS2O95864 444 aaKnown RBP8.48□□□□□ -1.05
CPSF1-203ENST00000527916 HAND1O96004 215 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 IGHA1P01876 353 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 PF4P02776 101 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 DBTP11182 482 aaKnown RBP8.48□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF19P17023 458 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF20P17024 532 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 LMO1P25800 156 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 PEX2P28328 305 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 ERP29P30040 261 aaKnown RBP8.48□□□□□ -1.05
CPSF1-203ENST00000527916 NPBWR2P48146 333 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 EDDM3BP56851 147 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF91Q05481 1191 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 RAB40BQ12829 278 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 SPIN3Q5JUX0 258 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 LPCAT4Q643R3 524 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 ZBTB49Q6ZSB9 765 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 SAXO1Q8IYX7 474 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 BATF2Q8N1L9 274 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 OR13D1Q8NGV5 346 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 PIFOQ8TCI5 191 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 C17orf50Q8WW18 174 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 EMG1Q92979 244 aaKnown RBP8.48□□□□□ -1.05
CPSF1-203ENST00000527916 RDH12Q96NR8 316 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 OPALINQ96PE5 141 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 SLC29A1Q99808 456 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF649Q9BS31 505 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 GPR61Q9BZJ8 451 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 HMG20AQ9NP66 347 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 SERTAD4Q9NUC0 356 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 FAM118AQ9NWS6 357 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 RPL36Q9Y3U8 105 aaKnown RBP8.48□□□□□ -1.05
CPSF1-203ENST00000527916 LINC00312Q9Y6C7 94 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 U3KQK5 164 aa8.48□□□□□ -1.05
CPSF1-203ENST00000527916 EPPK1P58107 5090 aaKnown RBP8.48□□□□□ -1.05
CPSF1-203ENST00000527916 TMEM212A6NML5 194 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 ODF3BA8MYP8 253 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 EBAG9O00559 213 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 SH2D1BO14796 132 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 MGST3O14880 152 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 KDM4BO94953 1096 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 CLIC3O95833 236 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 IGHV1-8P0DP01 117 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 BMXP51813 675 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 KRTAP10-11P60412 298 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 ARSJQ5FYB0 599 aaPredicted RBP8.47□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF626Q68DY1 528 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 LHFPL3Q86UP9 236 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 SERPINA12Q8IW75 414 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 Q8N2B8 174 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 PQLC1Q8N2U9 271 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 PARP16Q8N5Y8 322 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF676Q8N7Q3 588 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 OR52N4Q8NGI2 321 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 OR51A4Q8NGJ6 313 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 OR5D14Q8NGL3 314 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 OR13C3Q8NGS6 347 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 FOXRED1Q96CU9 486 aaPredicted RBP8.47□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF714Q96N38 554 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 ALG8Q9BVK2 526 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 PRSS22Q9GZN4 317 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 COMMD4Q9H0A8 199 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 ZCCHC4Q9H5U6 513 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 ZNF702PQ9H963 129 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 RBFOX1Q9NWB1 397 aaKnown RBP8.47□□□□□ -1.05
CPSF1-203ENST00000527916 ERVK13-1Q9NX77 482 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 MYRFQ9Y2G1 1151 aa8.47□□□□□ -1.05
CPSF1-203ENST00000527916 UBE2J1Q9Y385 318 aaPredicted RBP8.47□□□□□ -1.05
CPSF1-203ENST00000527916 A0A1W2PRX2 142 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 FUOMA2VDF0 154 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 CHST1O43916 411 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 PSPNO60542 156 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 ALDOBP05062 364 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 CCDC159P0C7I6 412 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 OCM2P0CE71 109 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 OCMP0CE72 109 aaPredicted RBP8.46□□□□□ -1.06
CPSF1-203ENST00000527916 PIPP12273 146 aaPredicted RBP8.46□□□□□ -1.06
CPSF1-203ENST00000527916 BCL3P20749 454 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 COX7A1P24310 79 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 POU3F4P49335 361 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 DYNLT3P51808 116 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 HABP2Q14520 560 aaPredicted RBP8.46□□□□□ -1.06
CPSF1-203ENST00000527916 GRK1Q15835 563 aa8.46□□□□□ -1.06
CPSF1-203ENST00000527916 KIAA2026Q5HYC2 2103 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms