RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 FGF21Q9NSA1 209 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 SIRT3Q9NTG7 399 aaPredicted RBP5.08□□□□□ -1.6
CD44-225ENST00000527326 C1orf123Q9NWV4 160 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 PEF1Q9UBV8 284 aaKnown RBP5.08□□□□□ -1.6
CD44-225ENST00000527326 KLK13Q9UKR3 277 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 NPIPA1Q9UND3 350 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 PPIAL4AQ9Y536 164 aa5.08□□□□□ -1.6
CD44-225ENST00000527326 LOC102724200A0A096LPH7 203 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 DDTLA6NHG4 134 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 DIRC3C9JPN6 131 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 C1QTNF3-AMACRE9PGA6 284 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 TAX1BP3O14907 124 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 NPIPB7O75200 414 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 ZNF217O75362 1048 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 ZNF205O95201 554 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 GJB5O95377 273 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 TSPAN13O95857 204 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 DDAH2O95865 285 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 HAND1O96004 215 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 IFNA1P01562 189 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 THY1P04216 161 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 SERPINA7P05543 415 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 HNRNPA1P09651 372 aaKnown RBP eCLIP5.07□□□□□ -1.6
CD44-225ENST00000527326 ZGLP1P0C6A0 271 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 PIRTP0C851 137 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 IGLC1P0CG04 106 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 AZU1P20160 251 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 KITLGP21583 273 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 MDKP21741 143 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 IL12BP29460 328 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 ARL3P36405 182 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 BUD31P41223 144 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 NPBWR2P48146 333 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 EFNB2P52799 333 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 CCL23P55773 120 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 TAS2R30P59541 319 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 TAS2R50P59544 299 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 TBPL1P62380 186 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 GNB2P62879 340 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 CSNK2A1P68400 391 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 SP4Q02446 784 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 ZFP36L1Q07352 338 aaKnown RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 TMEM267Q0VDI3 215 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 IL13RA2Q14627 380 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 PMCHL1Q16048 86 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 TMEM249Q2WGJ8 235 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 DCAF4L1Q3SXM0 396 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 VAX1Q5SQQ9 334 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 C9orf57Q5W0N0 161 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 CST9LP1Q5W188 147 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 WDR74Q6RFH5 385 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 CYP2G1PQ6ZSU1 146 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 SLC16A9Q7RTY1 509 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 DPY19L4Q7Z388 723 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 NEGR1Q7Z3B1 354 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 ADGRE4PQ86SQ3 457 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 UBALD2Q8IYN6 164 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 CFAP52Q8N1V2 620 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 C17orf78Q8N4C9 275 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 DEFB125Q8N687 156 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 C5orf17Q8NAS9 161 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 SLC16A11Q8NCK7 471 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 CSNK2A3Q8NEV1 391 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 OR2G3Q8NGZ4 309 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 FNDC9Q8TBE3 224 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 FGF13Q92913 245 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 TIFAQ96CG3 184 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 ZMYND19Q96E35 227 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 GNPNAT1Q96EK6 184 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 ZNF764Q96H86 408 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 SLC35G5Q96KT7 338 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 SIGLEC12Q96PQ1 595 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 RASL10BQ96S79 203 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 HSPB9Q9BQS6 159 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 WFDC6Q9BQY6 131 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 SMIM3Q9BZL3 60 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 PARLQ9H300 379 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 BANF2Q9H503 90 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 MTHFD2LQ9H903 347 aaPredicted RBP5.07□□□□□ -1.6
CD44-225ENST00000527326 MANBALQ9NQG1 85 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 AK3Q9UIJ7 227 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 PILRBQ9UKJ0 227 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 GPR132Q9UNW8 380 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 TRAPPC1Q9Y5R8 145 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 TNFRSF18Q9Y5U5 241 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 PXMP4Q9Y6I8 212 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 SMCHD1A6NHR9 2005 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 PLXNA1Q9UIW2 1896 aa5.07□□□□□ -1.6
CD44-225ENST00000527326 CKAP5Q14008 2032 aa5.06□□□□□ -1.6
CD44-225ENST00000527326 POLR2AP24928 1970 aaKnown RBP5.06□□□□□ -1.6
CD44-225ENST00000527326 DUXBA0A1W2PPF3 345 aa5.06□□□□□ -1.6
CD44-225ENST00000527326 SERINC4A6NH21 518 aa5.06□□□□□ -1.6
CD44-225ENST00000527326 CPSF4LA6NMK7 179 aaKnown RBP5.06□□□□□ -1.6
CD44-225ENST00000527326 TMEM212A6NML5 194 aa5.06□□□□□ -1.6
CD44-225ENST00000527326 HIDE1A8MVS5 230 aa5.06□□□□□ -1.6
CD44-225ENST00000527326 B4DGG1 531 aa5.06□□□□□ -1.6
CD44-225ENST00000527326 HHLA1C9JL84 531 aa5.06□□□□□ -1.6
CD44-225ENST00000527326 MPPED1O15442 326 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms