RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 OR51D1Q8NGF3 324 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 CREB3L1Q96BA8 519 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 BORCS8Q96FH0 119 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 MCRIP2Q9BUT9 160 aaKnown RBP12.8□□□□□ -0.36
PTPRU-210ENST00000527027 GAL3ST2Q9H3Q3 398 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 ADGRL4Q9HBW9 690 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 PAPOLBQ9NRJ5 636 aaKnown RBP12.8□□□□□ -0.36
PTPRU-210ENST00000527027 RBFOX1Q9NWB1 397 aaKnown RBP12.8□□□□□ -0.36
PTPRU-210ENST00000527027 GLS2Q9UI32 602 aa12.8□□□□□ -0.36
PTPRU-210ENST00000527027 TRGV10A0A0A0MS01 117 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 PSMB11A5LHX3 300 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 H3BSH0 61 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 FKBP6O75344 327 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 KRT8P05787 483 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 FCGR1AP12314 374 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 CDK2P24941 298 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 CEACAM3P40198 252 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 OR3A1P47881 315 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 NPBWR2P48146 333 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 THBS3P49746 956 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 PTGES3Q15185 160 aaKnown RBP12.79□□□□□ -0.36
PTPRU-210ENST00000527027 AADACL4Q5VUY2 407 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 CATSPERDQ86XM0 798 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 YIPF7Q8N8F6 280 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 CCDC54Q8NEL0 328 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 DNAJC9Q8WXX5 260 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 CORO2AQ92828 525 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 ZNF649Q9BS31 505 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 ADI1Q9BV57 179 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 CHST5Q9GZS9 411 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 TAS2R3Q9NYW6 316 aa12.79□□□□□ -0.36
PTPRU-210ENST00000527027 TRBV2A0A0J9YWF9 115 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 H0YHG0 523 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 BUB1B-PAK6H3BSN5 160 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 TOR1AO14656 332 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 ENTPD6O75354 484 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 CYB5AP00167 134 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 NHLRC4P0CG21 123 aaPredicted RBP12.78□□□□□ -0.36
PTPRU-210ENST00000527027 CD34P28906 385 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 ATP1B3P54709 279 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 CDC42P60953 191 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 EFNB1P98172 346 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 KPNB1Q14974 876 aaKnown RBP12.78□□□□□ -0.36
PTPRU-210ENST00000527027 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 TPTE2P1Q5T6R2 138 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 NXNL2Q5VZ03 156 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 UNQ9370/PRO34162Q6UXP9 181 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 DNAAF1Q8NEP3 725 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 PRRG3Q9BZD7 231 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 ZMAT5Q9UDW3 170 aaKnown RBP12.78□□□□□ -0.36
PTPRU-210ENST00000527027 PCDHGB5Q9Y5G0 923 aa12.78□□□□□ -0.36
PTPRU-210ENST00000527027 FUOMA2VDF0 154 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 FAM172BPA6NC97 362 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 OOSP1A8MZH6 123 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 LY6LH3BQJ8 138 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 SH2D1BO14796 132 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 CCDC159P0C7I6 412 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 FAM106CPP0CH98 169 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 CALCBP10092 127 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 PRKACAP17612 351 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 BCL3P20749 454 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 MNDAP41218 407 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 RBP2P50120 134 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 PRRX1P54821 245 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 SNU13P55769 128 aaKnown RBP12.77□□□□□ -0.37
PTPRU-210ENST00000527027 RPL23AP62750 156 aaKnown RBP12.77□□□□□ -0.37
PTPRU-210ENST00000527027 HLA-DRB5Q30154 266 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 CCDC144NLQ6NUI1 221 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 SSX6Q7RTT6 188 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 RNF144BQ7Z419 303 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 ZNF329Q86UD4 541 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 TCEANCQ8N8B7 351 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 C10orf35Q96D05 121 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 NRBF2Q96F24 287 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 ZNF286AQ9HBT8 521 aa12.77□□□□□ -0.37
PTPRU-210ENST00000527027 METTL15A6NJ78 407 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 M0R129 80 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 SIRPB1O00241 398 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 SLC6A1P30531 599 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 GDNFP39905 211 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 MYCNOSP40205 109 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 GLIPR1P48060 266 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 DAPP51397 102 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 MTCP1P56278 107 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 AESQ08117 197 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 FAHD1Q6P587 224 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 THNSL2Q86YJ6 484 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 TMEM163Q8TC26 289 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 PP6455Q8WZ26 134 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 TBX5Q99593 518 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 HMG20AQ9NP66 347 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 EXOSC4Q9NPD3 245 aaKnown RBP12.76□□□□□ -0.37
PTPRU-210ENST00000527027 ZFP57Q9NU63 452 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 AP4S1Q9Y587 144 aa12.76□□□□□ -0.37
PTPRU-210ENST00000527027 A0A087X0M5 115 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 A0A1B0GX30 115 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 FAM90A18PA6NE21 464 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 FAM90A16PA6NEW6 464 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 FAM90A20PA6NIJ5 464 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 FAM90A9PA6NNJ1 464 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms